Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 ATP5F1P2-201ENST00000398143 760 ntBASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 LRRC37BP1-201ENST00000398851 714 ntBASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 RNU6-575P-201ENST00000411326 105 ntBASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 NPM1P40-201ENST00000412758 733 ntBASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 NPM1P4-201ENST00000414095 812 ntBASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 AC099677.3-201ENST00000427081 395 ntBASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 PPIAP13-201ENST00000434706 478 ntBASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 CLUHP1-201ENST00000435012 1190 ntBASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 GTF2IP7-202ENST00000436677 309 ntBASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 CUBNP2-201ENST00000443534 1139 ntBASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 RPL12P39-201ENST00000455456 496 ntBASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 USP9YP25-201ENST00000457708 443 ntBASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 RN7SL515P-201ENST00000463999 297 ntBASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 PRDX3P4-201ENST00000470828 747 ntBASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 SIAH1P1-201ENST00000479411 923 ntBASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 AC108693.1-201ENST00000496068 432 ntBASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 AC026782.2-201ENST00000510845 636 ntBASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 AC020937.1-201ENST00000519677 1013 ntBASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 AC021171.1-201ENST00000603137 706 ntBASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 AC145423.1-201ENST00000605712 336 ntBASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 AL139099.4-201ENST00000614802 114 ntBASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 OR11H2-202ENST00000641517 1085 ntBASIC6.65□□□□□ -1.34
CCDC144BQ3MJ40 AC133552.1-201ENST00000569988 4007 ntBASIC6.65□□□□□ -1.35
CCDC144BQ3MJ40 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
CCDC144BQ3MJ40 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.65□□□□□ -1.35
CCDC144BQ3MJ40 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CCDC144BQ3MJ40 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.35
CCDC144BQ3MJ40 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.65□□□□□ -1.35
CCDC144BQ3MJ40 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CCDC144BQ3MJ40 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
CCDC144BQ3MJ40 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 AL355852.1-201ENST00000454081 1771 ntBASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 AC027228.2-201ENST00000567141 2154 ntBASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 HMGB1P5-201ENST00000255320 642 ntBASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 RN7SKP124-201ENST00000364730 341 ntBASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 OR51A3P-201ENST00000413596 924 ntBASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 DYNLL1P7-201ENST00000429273 258 ntBASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 AURKAPS1-201ENST00000451805 1212 ntBASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 SDC4P-201ENST00000453285 601 ntBASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 VN1R40P-201ENST00000455196 941 ntBASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 AC022215.1-201ENST00000481770 362 ntBASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 AC084024.2-201ENST00000503480 791 ntBASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 AC093534.1-201ENST00000504977 132 ntBASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 RNU6-615P-201ENST00000516065 106 ntBASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 RN7SKP288-201ENST00000516227 268 ntBASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 IGHVIII-38-1-201ENST00000521454 282 ntBASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 AADACP1-206ENST00000561502 1193 ntBASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 DPPA2P4-201ENST00000563717 878 ntBASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 AC011453.2-201ENST00000603737 729 ntBASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 AL021707.7-201ENST00000607991 416 ntBASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 AC097478.2-201ENST00000610572 514 ntBASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 AL158163.2-201ENST00000619110 700 ntBASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC144BQ3MJ40 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms