Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
SHMT2P34897 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.66□□□□□ -1.66
SHMT2P34897 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.66□□□□□ -1.66
SHMT2P34897 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.66□□□□□ -1.66
SHMT2P34897 AC006453.5-201ENST00000636451 619 ntBASIC4.66□□□□□ -1.66
SHMT2P34897 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.66□□□□□ -1.66
SHMT2P34897 AC107068.1-201ENST00000563286 4218 ntBASIC4.66□□□□□ -1.66
SHMT2P34897 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHMT2P34897 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHMT2P34897 A2MP1-204ENST00000566278 4130 ntBASIC4.66□□□□□ -1.66
SHMT2P34897 AC007382.1-201ENST00000624376 2618 ntBASIC4.66□□□□□ -1.66
SHMT2P34897 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.66□□□□□ -1.66
SHMT2P34897 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.66□□□□□ -1.66
SHMT2P34897 DDX18P5-201ENST00000534547 1306 ntBASIC4.66□□□□□ -1.66
SHMT2P34897 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SHMT2P34897 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHMT2P34897 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SHMT2P34897 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHMT2P34897 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SHMT2P34897 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SHMT2P34897 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
SHMT2P34897 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.65□□□□□ -1.66
SHMT2P34897 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
SHMT2P34897 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
SHMT2P34897 AC008549.2-201ENST00000333482 706 ntBASIC4.65□□□□□ -1.67
SHMT2P34897 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
SHMT2P34897 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SHMT2P34897 AP000580.1-201ENST00000404439 358 ntBASIC4.65□□□□□ -1.67
SHMT2P34897 SNORA11B-201ENST00000408175 129 ntBASIC4.65□□□□□ -1.67
SHMT2P34897 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.65□□□□□ -1.67
SHMT2P34897 AC004074.1-201ENST00000421810 1063 ntBASIC4.65□□□□□ -1.67
SHMT2P34897 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SHMT2P34897 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.65□□□□□ -1.67
SHMT2P34897 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.65□□□□□ -1.67
SHMT2P34897 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.65□□□□□ -1.67
SHMT2P34897 RPS23P1-201ENST00000491662 432 ntBASIC4.65□□□□□ -1.67
SHMT2P34897 DEFB109F-201ENST00000491870 277 ntBASIC4.65□□□□□ -1.67
SHMT2P34897 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SHMT2P34897 RN7SKP276-201ENST00000516242 268 ntBASIC4.65□□□□□ -1.67
SHMT2P34897 SOX5P1-201ENST00000524155 1127 ntBASIC4.65□□□□□ -1.67
SHMT2P34897 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.65□□□□□ -1.67
SHMT2P34897 AC008147.3-201ENST00000548666 354 ntBASIC4.65□□□□□ -1.67
SHMT2P34897 AC011270.1-201ENST00000558606 583 ntBASIC4.65□□□□□ -1.67
SHMT2P34897 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.65□□□□□ -1.67
SHMT2P34897 MIR5699-201ENST00000578903 90 ntBASIC4.65□□□□□ -1.67
SHMT2P34897 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.65□□□□□ -1.67
SHMT2P34897 uc_338.18-201ENST00000615451 175 ntBASIC4.65□□□□□ -1.67
SHMT2P34897 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.65□□□□□ -1.67
SHMT2P34897 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.65□□□□□ -1.67
SHMT2P34897 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
SHMT2P34897 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
SHMT2P34897 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SHMT2P34897 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.65□□□□□ -1.67
SHMT2P34897 AC108751.5-201ENST00000492880 1336 ntBASIC4.65□□□□□ -1.67
SHMT2P34897 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SHMT2P34897 AL606537.1-201ENST00000607258 2011 ntBASIC4.65□□□□□ -1.67
SHMT2P34897 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.65□□□□□ -1.67
SHMT2P34897 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.65□□□□□ -1.67
SHMT2P34897 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SHMT2P34897 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SHMT2P34897 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.65□□□□□ -1.67
SHMT2P34897 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
SHMT2P34897 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHMT2P34897 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.64□□□□□ -1.67
SHMT2P34897 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.64□□□□□ -1.67
SHMT2P34897 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SHMT2P34897 CASC19-206ENST00000641028 1430 ntBASIC4.64□□□□□ -1.67
SHMT2P34897 OR51C1P-202ENST00000641159 1444 ntBASIC4.64□□□□□ -1.67
SHMT2P34897 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
SHMT2P34897 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.64□□□□□ -1.67
SHMT2P34897 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
SHMT2P34897 ZFRP1-201ENST00000457579 2970 ntBASIC4.64□□□□□ -1.67
SHMT2P34897 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.64□□□□□ -1.67
SHMT2P34897 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
SHMT2P34897 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.64□□□□□ -1.67
SHMT2P34897 AC103591.2-201ENST00000265259 766 ntBASIC4.64□□□□□ -1.67
SHMT2P34897 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHMT2P34897 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHMT2P34897 AL034379.1-201ENST00000423216 253 ntBASIC4.64□□□□□ -1.67
SHMT2P34897 EIF4HP2-201ENST00000424380 563 ntBASIC4.64□□□□□ -1.67
SHMT2P34897 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.64□□□□□ -1.67
SHMT2P34897 AC006967.1-201ENST00000467608 589 ntBASIC4.64□□□□□ -1.67
SHMT2P34897 AC011005.3-201ENST00000491624 395 ntBASIC4.64□□□□□ -1.67
SHMT2P34897 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SHMT2P34897 SCARNA22-201ENST00000503991 125 ntBASIC4.64□□□□□ -1.67
SHMT2P34897 AC091917.2-201ENST00000505002 744 ntBASIC4.64□□□□□ -1.67
SHMT2P34897 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.64□□□□□ -1.67
SHMT2P34897 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.64□□□□□ -1.67
SHMT2P34897 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.64□□□□□ -1.67
SHMT2P34897 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.64□□□□□ -1.67
SHMT2P34897 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.64□□□□□ -1.67
SHMT2P34897 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.64□□□□□ -1.67
SHMT2P34897 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.64□□□□□ -1.67
SHMT2P34897 MIR4270-201ENST00000581799 70 ntBASIC4.64□□□□□ -1.67
SHMT2P34897 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.64□□□□□ -1.67
SHMT2P34897 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.64□□□□□ -1.67
SHMT2P34897 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SHMT2P34897 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.64□□□□□ -1.67
SHMT2P34897 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHMT2P34897 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms