Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC8.33□□□□□ -1.08
PTPREP23469 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PTPREP23469 AL031846.1-201ENST00000560933 314 ntBASIC8.33□□□□□ -1.08
PTPREP23469 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC8.33□□□□□ -1.08
PTPREP23469 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC8.33□□□□□ -1.08
PTPREP23469 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC8.33□□□□□ -1.08
PTPREP23469 RPSAP66-201ENST00000592196 606 ntBASIC8.33□□□□□ -1.08
PTPREP23469 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC8.33□□□□□ -1.08
PTPREP23469 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC8.33□□□□□ -1.08
PTPREP23469 AC009779.8-202ENST00000607990 932 ntBASIC8.33□□□□□ -1.08
PTPREP23469 MIR6780B-201ENST00000610307 79 ntBASIC8.33□□□□□ -1.08
PTPREP23469 MIR6885-201ENST00000612241 66 ntBASIC8.33□□□□□ -1.08
PTPREP23469 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC8.33□□□□□ -1.08
PTPREP23469 AC078938.1-201ENST00000620993 318 ntBASIC8.33□□□□□ -1.08
PTPREP23469 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC8.33□□□□□ -1.08
PTPREP23469 AC087894.3-201ENST00000623682 349 ntBASIC8.33□□□□□ -1.08
PTPREP23469 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PTPREP23469 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PTPREP23469 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC8.33□□□□□ -1.08
PTPREP23469 DDX18P6-201ENST00000450119 1997 ntBASIC8.33□□□□□ -1.08
PTPREP23469 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PTPREP23469 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PTPREP23469 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
PTPREP23469 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
PTPREP23469 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC8.33□□□□□ -1.08
PTPREP23469 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
PTPREP23469 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC8.33□□□□□ -1.08
PTPREP23469 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
PTPREP23469 AC092999.1-201ENST00000624004 1924 ntBASIC8.33□□□□□ -1.08
PTPREP23469 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
PTPREP23469 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
PTPREP23469 TBC1D5-209ENST00000429383 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PTPREP23469 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
PTPREP23469 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PTPREP23469 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PTPREP23469 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PTPREP23469 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
PTPREP23469 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC8.32□□□□□ -1.08
PTPREP23469 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PTPREP23469 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
PTPREP23469 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC8.32□□□□□ -1.08
PTPREP23469 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PTPREP23469 AL162171.3-201ENST00000617439 3178 ntBASIC8.32□□□□□ -1.08
PTPREP23469 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PTPREP23469 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
PTPREP23469 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
PTPREP23469 RNU6-1120P-201ENST00000362988 108 ntBASIC8.32□□□□□ -1.08
PTPREP23469 RNU6-831P-201ENST00000384548 107 ntBASIC8.32□□□□□ -1.08
PTPREP23469 MIR99A-201ENST00000384906 81 ntBASIC8.32□□□□□ -1.08
PTPREP23469 RNA5SP53-201ENST00000391299 120 ntBASIC8.32□□□□□ -1.08
PTPREP23469 GEMIN2P2-201ENST00000418195 715 ntBASIC8.32□□□□□ -1.08
PTPREP23469 RPA2P2-201ENST00000419698 796 ntBASIC8.32□□□□□ -1.08
PTPREP23469 HSPE1P1-201ENST00000421494 318 ntBASIC8.32□□□□□ -1.08
PTPREP23469 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC8.32□□□□□ -1.08
PTPREP23469 OR10T1P-201ENST00000424327 947 ntBASIC8.32□□□□□ -1.08
PTPREP23469 USP24P1-201ENST00000433802 779 ntBASIC8.32□□□□□ -1.08
PTPREP23469 RPL12P49-201ENST00000441100 121 ntBASIC8.32□□□□□ -1.08
PTPREP23469 FAM103A2P-201ENST00000444122 354 ntBASIC8.32□□□□□ -1.08
PTPREP23469 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC8.32□□□□□ -1.08
PTPREP23469 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC8.32□□□□□ -1.08
PTPREP23469 RPL31P11-202ENST00000454082 372 ntBASIC8.32□□□□□ -1.08
PTPREP23469 BTF3P5-201ENST00000457252 467 ntBASIC8.32□□□□□ -1.08
PTPREP23469 OR9A1P-202ENST00000484361 945 ntBASIC8.32□□□□□ -1.08
PTPREP23469 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PTPREP23469 RPL10P18-201ENST00000519384 309 ntBASIC8.32□□□□□ -1.08
PTPREP23469 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC8.32□□□□□ -1.08
PTPREP23469 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC8.32□□□□□ -1.08
PTPREP23469 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC8.32□□□□□ -1.08
PTPREP23469 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC8.32□□□□□ -1.08
PTPREP23469 AC007375.1-201ENST00000554513 578 ntBASIC8.32□□□□□ -1.08
PTPREP23469 AL137100.2-201ENST00000555786 315 ntBASIC8.32□□□□□ -1.08
PTPREP23469 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC8.32□□□□□ -1.08
PTPREP23469 RN7SL66P-201ENST00000582099 264 ntBASIC8.32□□□□□ -1.08
PTPREP23469 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC8.32□□□□□ -1.08
PTPREP23469 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC8.32□□□□□ -1.08
PTPREP23469 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC8.32□□□□□ -1.08
PTPREP23469 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC8.32□□□□□ -1.08
PTPREP23469 AL022345.1-201ENST00000607292 135 ntBASIC8.32□□□□□ -1.08
PTPREP23469 AC097641.3-201ENST00000613523 464 ntBASIC8.32□□□□□ -1.08
PTPREP23469 AC083806.3-201ENST00000614016 455 ntBASIC8.32□□□□□ -1.08
PTPREP23469 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC8.32□□□□□ -1.08
PTPREP23469 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
PTPREP23469 AC007485.2-201ENST00000623493 1667 ntBASIC8.32□□□□□ -1.08
PTPREP23469 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC8.32□□□□□ -1.08
PTPREP23469 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC8.32□□□□□ -1.08
PTPREP23469 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PTPREP23469 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PTPREP23469 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PTPREP23469 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PTPREP23469 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC8.32□□□□□ -1.08
PTPREP23469 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PTPREP23469 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
PTPREP23469 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC8.32□□□□□ -1.08
PTPREP23469 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PTPREP23469 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PTPREP23469 BX322650.1-201ENST00000332359 2143 ntBASIC8.32□□□□□ -1.08
PTPREP23469 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC8.32□□□□□ -1.08
PTPREP23469 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
PTPREP23469 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC8.31□□□□□ -1.08
PTPREP23469 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms