Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
NFKB1P19838 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
NFKB1P19838 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
NFKB1P19838 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.78□□□□□ -1.32
NFKB1P19838 AC112255.1-201ENST00000624070 2493 ntBASIC6.78□□□□□ -1.32
NFKB1P19838 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
NFKB1P19838 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
NFKB1P19838 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
NFKB1P19838 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.78□□□□□ -1.32
NFKB1P19838 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.78□□□□□ -1.32
NFKB1P19838 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.78□□□□□ -1.32
NFKB1P19838 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.78□□□□□ -1.32
NFKB1P19838 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.78□□□□□ -1.32
NFKB1P19838 AC013488.1-201ENST00000526618 1838 ntBASIC6.78□□□□□ -1.32
NFKB1P19838 AC025809.2-201ENST00000625085 1802 ntBASIC6.78□□□□□ -1.32
NFKB1P19838 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
NFKB1P19838 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
NFKB1P19838 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.78□□□□□ -1.32
NFKB1P19838 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.78□□□□□ -1.32
NFKB1P19838 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
NFKB1P19838 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
NFKB1P19838 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.77□□□□□ -1.33
NFKB1P19838 AP000866.6-201ENST00000638898 3579 ntBASIC6.77□□□□□ -1.33
NFKB1P19838 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
NFKB1P19838 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
NFKB1P19838 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
NFKB1P19838 PABPC1P8-201ENST00000452851 2086 ntBASIC6.77□□□□□ -1.33
NFKB1P19838 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
NFKB1P19838 Y_RNA.394-201ENST00000383942 103 ntBASIC6.77□□□□□ -1.33
NFKB1P19838 RSU1P3-201ENST00000412878 835 ntBASIC6.77□□□□□ -1.33
NFKB1P19838 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC6.77□□□□□ -1.33
NFKB1P19838 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.77□□□□□ -1.33
NFKB1P19838 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC6.77□□□□□ -1.33
NFKB1P19838 AC004690.1-201ENST00000418216 328 ntBASIC6.77□□□□□ -1.33
NFKB1P19838 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC6.77□□□□□ -1.33
NFKB1P19838 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC6.77□□□□□ -1.33
NFKB1P19838 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.77□□□□□ -1.33
NFKB1P19838 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.77□□□□□ -1.33
NFKB1P19838 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC6.77□□□□□ -1.33
NFKB1P19838 AL513175.1-201ENST00000431492 780 ntBASIC6.77□□□□□ -1.33
NFKB1P19838 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.77□□□□□ -1.33
NFKB1P19838 RPL21P110-201ENST00000433345 446 ntBASIC6.77□□□□□ -1.33
NFKB1P19838 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.77□□□□□ -1.33
NFKB1P19838 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC6.77□□□□□ -1.33
NFKB1P19838 SNRPBP1-201ENST00000443634 282 ntBASIC6.77□□□□□ -1.33
NFKB1P19838 GAPDHP20-201ENST00000444107 1007 ntBASIC6.77□□□□□ -1.33
NFKB1P19838 AL845321.1-201ENST00000444603 348 ntBASIC6.77□□□□□ -1.33
NFKB1P19838 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC6.77□□□□□ -1.33
NFKB1P19838 YWHAQP9-201ENST00000445891 512 ntBASIC6.77□□□□□ -1.33
NFKB1P19838 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.77□□□□□ -1.33
NFKB1P19838 SLAMF6P1-201ENST00000451067 602 ntBASIC6.77□□□□□ -1.33
NFKB1P19838 RPL7AP52-201ENST00000458096 790 ntBASIC6.77□□□□□ -1.33
NFKB1P19838 AC104687.1-201ENST00000485829 412 ntBASIC6.77□□□□□ -1.33
NFKB1P19838 RPL39P36-201ENST00000490784 156 ntBASIC6.77□□□□□ -1.33
NFKB1P19838 AC023818.1-201ENST00000498379 384 ntBASIC6.77□□□□□ -1.33
NFKB1P19838 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC6.77□□□□□ -1.33
NFKB1P19838 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
NFKB1P19838 SNORA58-201ENST00000505219 137 ntBASIC6.77□□□□□ -1.33
NFKB1P19838 OR52H2P-201ENST00000514607 902 ntBASIC6.77□□□□□ -1.33
NFKB1P19838 RNA5SP135-201ENST00000517019 125 ntBASIC6.77□□□□□ -1.33
NFKB1P19838 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.77□□□□□ -1.33
NFKB1P19838 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
NFKB1P19838 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.77□□□□□ -1.33
NFKB1P19838 HPRT1P3-201ENST00000539521 576 ntBASIC6.77□□□□□ -1.33
NFKB1P19838 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.77□□□□□ -1.33
NFKB1P19838 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.77□□□□□ -1.33
NFKB1P19838 AC010287.1-201ENST00000566916 357 ntBASIC6.77□□□□□ -1.33
NFKB1P19838 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.77□□□□□ -1.33
NFKB1P19838 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC6.77□□□□□ -1.33
NFKB1P19838 AL157899.1-201ENST00000604110 936 ntBASIC6.77□□□□□ -1.33
NFKB1P19838 AC112187.2-201ENST00000604345 283 ntBASIC6.77□□□□□ -1.33
NFKB1P19838 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC6.77□□□□□ -1.33
NFKB1P19838 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.77□□□□□ -1.33
NFKB1P19838 AC027559.1-201ENST00000636288 271 ntBASIC6.77□□□□□ -1.33
NFKB1P19838 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
NFKB1P19838 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
NFKB1P19838 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
NFKB1P19838 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
NFKB1P19838 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
NFKB1P19838 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.77□□□□□ -1.33
NFKB1P19838 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
NFKB1P19838 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
NFKB1P19838 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
NFKB1P19838 FARSBP1-201ENST00000435808 1778 ntBASIC6.77□□□□□ -1.33
NFKB1P19838 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
NFKB1P19838 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
NFKB1P19838 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
NFKB1P19838 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NFKB1P19838 GDI2P1-201ENST00000429312 1336 ntBASIC6.76□□□□□ -1.33
NFKB1P19838 CCT4P2-201ENST00000233836 1548 ntBASIC6.76□□□□□ -1.33
NFKB1P19838 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NFKB1P19838 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NFKB1P19838 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NFKB1P19838 AC022905.1-201ENST00000503430 3048 ntBASIC6.76□□□□□ -1.33
NFKB1P19838 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
NFKB1P19838 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
NFKB1P19838 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.76□□□□□ -1.33
NFKB1P19838 RNA5SP512-201ENST00000364550 120 ntBASIC6.76□□□□□ -1.33
NFKB1P19838 RN7SKP191-201ENST00000364713 306 ntBASIC6.76□□□□□ -1.33
NFKB1P19838 SUGT1P1-201ENST00000379514 476 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms