Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 SULT1C2P2-201ENST00000562517 294 ntBASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 AC233702.9-201ENST00000581528 203 ntBASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 AC133644.2-201ENST00000608142 540 ntBASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
ATG4BQ9Y4P1 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 NEAT1-202ENST00000501122 22743 ntBASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 AC017079.1-201ENST00000333650 415 ntBASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 AL109941.1-201ENST00000401925 229 ntBASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 AL078599.1-201ENST00000402075 293 ntBASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 FAM204CP-201ENST00000424489 642 ntBASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 CYCSP11-201ENST00000436426 315 ntBASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 AL157827.1-201ENST00000447622 132 ntBASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 RPL7P61-201ENST00000451721 751 ntBASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 RN7SL319P-201ENST00000480656 221 ntBASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 RPL37AP8-201ENST00000494116 276 ntBASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 AC231760.1-201ENST00000498002 260 ntBASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 MRPS33P2-201ENST00000507850 322 ntBASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 FABP5P6-201ENST00000510588 409 ntBASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 AL671862.1-201ENST00000515851 349 ntBASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 RPL23AP53-201ENST00000521854 457 ntBASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 AC012414.2-201ENST00000559474 187 ntBASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 MIR4472-2-201ENST00000582069 67 ntBASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 AC104687.2-201ENST00000604442 342 ntBASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 AL049794.2-201ENST00000616301 365 ntBASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 AL121890.2-201ENST00000617644 465 ntBASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 AC083843.2-201ENST00000568248 6253 ntBASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 AC093591.2-201ENST00000565254 3843 ntBASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 THAP12P5-201ENST00000405864 2275 ntBASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.69□□□□□ -1.66
ATG4BQ9Y4P1 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 MIR421-201ENST00000365696 85 ntBASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 Z97832.1-201ENST00000402490 328 ntBASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 AC006065.1-201ENST00000422539 802 ntBASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 AC022022.1-201ENST00000430304 178 ntBASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 TPRKBP1-201ENST00000456243 481 ntBASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 RPL5P13-201ENST00000462840 709 ntBASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 NPM1P29-201ENST00000483112 803 ntBASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 NDUFB5P1-201ENST00000508134 564 ntBASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 AC108120.2-201ENST00000512973 294 ntBASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 AC026688.1-201ENST00000520639 1168 ntBASIC4.68□□□□□ -1.66
ATG4BQ9Y4P1 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms