Protein–RNA interactions for Protein: Q9NXX6

NSMCE4A, Non-structural maintenance of chromosomes element 4 homolog A, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4AQ9NXX6 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NSMCE4AQ9NXX6 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NSMCE4AQ9NXX6 ASNSP1-201ENST00000518311 1939 ntBASIC5.21□□□□□ -1.58
NSMCE4AQ9NXX6 AC004817.4-201ENST00000602396 3625 ntBASIC5.21□□□□□ -1.58
NSMCE4AQ9NXX6 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
NSMCE4AQ9NXX6 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
NSMCE4AQ9NXX6 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.21□□□□□ -1.58
NSMCE4AQ9NXX6 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NSMCE4AQ9NXX6 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 AL353743.4-201ENST00000422653 1547 ntBASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 HSPA8P19-201ENST00000505359 1517 ntBASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 RNA5SP90-201ENST00000364801 99 ntBASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 RN7SKP286-201ENST00000410894 299 ntBASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 RPL24P2-201ENST00000421023 475 ntBASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 COX6CP13-201ENST00000428703 226 ntBASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 DYNLL1P7-201ENST00000429273 258 ntBASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 MTCO1P43-201ENST00000431831 488 ntBASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 RPS29P10-201ENST00000439197 166 ntBASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 MRPL35P2-201ENST00000448009 511 ntBASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 RANP1-206ENST00000455094 651 ntBASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 RPL7P45-201ENST00000455851 743 ntBASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 EIF2S2P5-201ENST00000457635 968 ntBASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 AC091180.1-201ENST00000462104 372 ntBASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 OR8A2P-201ENST00000528631 952 ntBASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 AC090515.3-201ENST00000560431 315 ntBASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 AC011840.5-201ENST00000582125 771 ntBASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 NF1P5-201ENST00000588287 448 ntBASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 PCNAP1-202ENST00000595299 752 ntBASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 AC108359.1-201ENST00000616451 1211 ntBASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 AC037198.3-201ENST00000616754 526 ntBASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 AC008432.1-201ENST00000615912 1320 ntBASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
NSMCE4AQ9NXX6 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
NSMCE4AQ9NXX6 AC092162.3-201ENST00000624511 1624 ntBASIC5.19□□□□□ -1.58
NSMCE4AQ9NXX6 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NSMCE4AQ9NXX6 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.19□□□□□ -1.58
NSMCE4AQ9NXX6 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
NSMCE4AQ9NXX6 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.19□□□□□ -1.58
NSMCE4AQ9NXX6 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NSMCE4AQ9NXX6 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
NSMCE4AQ9NXX6 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
NSMCE4AQ9NXX6 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.19□□□□□ -1.58
NSMCE4AQ9NXX6 RNA5SP339-201ENST00000390987 122 ntBASIC5.19□□□□□ -1.58
NSMCE4AQ9NXX6 AL035419.1-201ENST00000397037 564 ntBASIC5.19□□□□□ -1.58
NSMCE4AQ9NXX6 AL035079.1-201ENST00000405210 287 ntBASIC5.19□□□□□ -1.58
NSMCE4AQ9NXX6 OR4K12P-201ENST00000406538 961 ntBASIC5.19□□□□□ -1.58
NSMCE4AQ9NXX6 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.19□□□□□ -1.58
NSMCE4AQ9NXX6 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.19□□□□□ -1.58
NSMCE4AQ9NXX6 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.19□□□□□ -1.58
NSMCE4AQ9NXX6 IPPKP1-201ENST00000422501 768 ntBASIC5.19□□□□□ -1.58
NSMCE4AQ9NXX6 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.19□□□□□ -1.58
NSMCE4AQ9NXX6 UBE2D3P3-201ENST00000426992 425 ntBASIC5.19□□□□□ -1.58
NSMCE4AQ9NXX6 AC093422.3-201ENST00000428506 305 ntBASIC5.19□□□□□ -1.58
NSMCE4AQ9NXX6 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.19□□□□□ -1.58
NSMCE4AQ9NXX6 RPL35AP21-201ENST00000437667 333 ntBASIC5.19□□□□□ -1.58
NSMCE4AQ9NXX6 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.19□□□□□ -1.58
NSMCE4AQ9NXX6 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.19□□□□□ -1.58
NSMCE4AQ9NXX6 MOB1AP2-201ENST00000446060 614 ntBASIC5.19□□□□□ -1.58
NSMCE4AQ9NXX6 AC004980.3-201ENST00000447046 365 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms