Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 C2CD5-218ENST00000545552 3471 ntTSL 2 BASIC7.07□□□□□ -1.28
USB1Q9BQ65 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
USB1Q9BQ65 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.07□□□□□ -1.28
USB1Q9BQ65 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
USB1Q9BQ65 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
USB1Q9BQ65 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
USB1Q9BQ65 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
USB1Q9BQ65 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC7.06□□□□□ -1.28
USB1Q9BQ65 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC7.06□□□□□ -1.28
USB1Q9BQ65 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC7.06□□□□□ -1.28
USB1Q9BQ65 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.06□□□□□ -1.28
USB1Q9BQ65 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
USB1Q9BQ65 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC7.06□□□□□ -1.28
USB1Q9BQ65 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
USB1Q9BQ65 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
USB1Q9BQ65 CCR3-208ENST00000545097 1786 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
USB1Q9BQ65 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
USB1Q9BQ65 CDC27P3-201ENST00000635418 1910 ntBASIC7.06□□□□□ -1.28
USB1Q9BQ65 AC004014.2-201ENST00000623718 5122 ntBASIC7.06□□□□□ -1.28
USB1Q9BQ65 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
USB1Q9BQ65 OR1G1-201ENST00000328890 998 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
USB1Q9BQ65 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
USB1Q9BQ65 RNU6-1252P-201ENST00000363054 104 ntBASIC7.06□□□□□ -1.28
USB1Q9BQ65 SNORD113-7-201ENST00000363762 77 ntBASIC7.06□□□□□ -1.28
USB1Q9BQ65 SMCP-201ENST00000368765 775 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
USB1Q9BQ65 Y_RNA.552-201ENST00000384665 112 ntBASIC7.06□□□□□ -1.28
USB1Q9BQ65 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
USB1Q9BQ65 IGLC6-201ENST00000410078 317 ntBASIC7.06□□□□□ -1.28
USB1Q9BQ65 OR6C66P-201ENST00000414917 930 ntBASIC7.06□□□□□ -1.28
USB1Q9BQ65 SKA2P1-201ENST00000425592 390 ntBASIC7.06□□□□□ -1.28
USB1Q9BQ65 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC7.06□□□□□ -1.28
USB1Q9BQ65 AC099066.1-201ENST00000428148 534 ntTSL 5 BASIC7.06□□□□□ -1.28
USB1Q9BQ65 TEX41-206ENST00000432608 661 ntTSL 3 BASIC7.06□□□□□ -1.28
USB1Q9BQ65 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.06□□□□□ -1.28
USB1Q9BQ65 AC092802.3-201ENST00000434207 420 ntTSL 3 BASIC7.06□□□□□ -1.28
USB1Q9BQ65 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC7.06□□□□□ -1.28
USB1Q9BQ65 AC005019.1-201ENST00000436455 431 ntBASIC7.06□□□□□ -1.28
USB1Q9BQ65 AL606534.2-201ENST00000436756 624 ntTSL 5 BASIC7.06□□□□□ -1.28
USB1Q9BQ65 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC7.06□□□□□ -1.28
USB1Q9BQ65 EFCAB14P1-201ENST00000442409 463 ntBASIC7.06□□□□□ -1.28
USB1Q9BQ65 AL122013.1-201ENST00000473054 801 ntBASIC7.06□□□□□ -1.28
USB1Q9BQ65 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC7.06□□□□□ -1.28
USB1Q9BQ65 RPL7AP26-201ENST00000488538 813 ntBASIC7.06□□□□□ -1.28
USB1Q9BQ65 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC7.06□□□□□ -1.28
USB1Q9BQ65 AC008592.1-201ENST00000503091 665 ntTSL 3 BASIC7.06□□□□□ -1.28
USB1Q9BQ65 AC025180.1-201ENST00000505701 595 ntTSL 4 BASIC7.06□□□□□ -1.28
USB1Q9BQ65 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC7.06□□□□□ -1.28
USB1Q9BQ65 AC068134.3-201ENST00000513620 788 ntBASIC7.06□□□□□ -1.28
USB1Q9BQ65 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC7.06□□□□□ -1.28
USB1Q9BQ65 Y_RNA.661-201ENST00000516003 99 ntBASIC7.06□□□□□ -1.28
USB1Q9BQ65 RNU6-1143P-201ENST00000516125 104 ntBASIC7.06□□□□□ -1.28
USB1Q9BQ65 IGHVIII-67-3-201ENST00000517650 232 ntBASIC7.06□□□□□ -1.28
USB1Q9BQ65 AP000763.2-201ENST00000540641 163 ntBASIC7.06□□□□□ -1.28
USB1Q9BQ65 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC7.06□□□□□ -1.28
USB1Q9BQ65 RPL21P12-201ENST00000559810 515 ntBASIC7.06□□□□□ -1.28
USB1Q9BQ65 MT1B-202ENST00000562399 351 ntTSL 3 BASIC7.06□□□□□ -1.28
USB1Q9BQ65 AC133565.1-201ENST00000569218 488 ntTSL 3 BASIC7.06□□□□□ -1.28
USB1Q9BQ65 SKA2-203ENST00000578105 689 ntTSL 2 BASIC7.06□□□□□ -1.28
USB1Q9BQ65 AC113195.1-201ENST00000579952 141 ntBASIC7.06□□□□□ -1.28
USB1Q9BQ65 AC011447.2-201ENST00000592921 283 ntBASIC7.06□□□□□ -1.28
USB1Q9BQ65 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC7.06□□□□□ -1.28
USB1Q9BQ65 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC7.06□□□□□ -1.28
USB1Q9BQ65 AL121992.2-201ENST00000606262 256 ntBASIC7.06□□□□□ -1.28
USB1Q9BQ65 OR6R2P-201ENST00000609216 300 ntBASIC7.06□□□□□ -1.28
USB1Q9BQ65 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC7.06□□□□□ -1.28
USB1Q9BQ65 AC005790.1-201ENST00000619774 450 ntBASIC7.06□□□□□ -1.28
USB1Q9BQ65 UOX-205ENST00000640983 544 ntTSL 4 BASIC7.06□□□□□ -1.28
USB1Q9BQ65 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
USB1Q9BQ65 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
USB1Q9BQ65 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
USB1Q9BQ65 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
USB1Q9BQ65 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
USB1Q9BQ65 MTND5P30-201ENST00000452896 1731 ntBASIC7.06□□□□□ -1.28
USB1Q9BQ65 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
USB1Q9BQ65 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
USB1Q9BQ65 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
USB1Q9BQ65 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
USB1Q9BQ65 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
USB1Q9BQ65 EIF4ENIF1-201ENST00000330125 3544 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
USB1Q9BQ65 TCP11X1-202ENST00000622971 1372 ntBASIC7.06□□□□□ -1.28
USB1Q9BQ65 SLC31A1-201ENST00000374212 4744 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
USB1Q9BQ65 IL5RA-206ENST00000430514 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
USB1Q9BQ65 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
USB1Q9BQ65 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
USB1Q9BQ65 RAB5B-210ENST00000553116 3322 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
USB1Q9BQ65 A2ML1-205ENST00000539547 3460 ntTSL 2 BASIC7.06□□□□□ -1.28
USB1Q9BQ65 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
USB1Q9BQ65 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC7.05□□□□□ -1.28
USB1Q9BQ65 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 RMST-202ENST00000541282 2099 ntTSL 2 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
USB1Q9BQ65 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
USB1Q9BQ65 LINC01142-201ENST00000440404 1457 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
USB1Q9BQ65 ETS1-204ENST00000526145 3389 ntTSL 5 BASIC7.05□□□□□ -1.28
USB1Q9BQ65 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms