Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 GTF2IP3-201ENST00000433887 494 ntBASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 AL392003.1-201ENST00000434394 243 ntBASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 EEF1B2P6-201ENST00000445713 673 ntBASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 RPL7P16-201ENST00000479738 738 ntBASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 AC068724.1-201ENST00000487100 792 ntBASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 RN7SL466P-201ENST00000497546 295 ntBASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 AC010424.1-201ENST00000506336 297 ntBASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 HMGB1P47-201ENST00000511281 589 ntBASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 AC138938.1-201ENST00000515431 782 ntBASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 HMGB1P46-201ENST00000520062 610 ntBASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 AP001284.1-201ENST00000528393 2118 ntBASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 AL512347.1-201ENST00000566420 503 ntBASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 MTCO3P24-201ENST00000572729 782 ntBASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 AF131215.7-201ENST00000602443 707 ntBASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 AC104695.2-201ENST00000605056 775 ntBASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 AP000255.1-201ENST00000610276 676 ntBASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 AL450489.1-201ENST00000612071 468 ntBASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 AC007490.1-201ENST00000624321 703 ntBASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 CASC19-264ENST00000641912 1184 ntBASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 BX005019.1-201ENST00000561881 1810 ntBASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 AP002512.4-202ENST00000641599 4530 ntBASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.94□□□□□ -1.46
CDK5RAP1Q96SZ6 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 RNA5SP242-201ENST00000364171 118 ntBASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 Y_RNA.517-201ENST00000384551 106 ntBASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 RNU6-796P-201ENST00000391086 107 ntBASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 U3.23-201ENST00000391132 200 ntBASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 RN7SKP279-201ENST00000411383 298 ntBASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 MTND4P28-201ENST00000426217 387 ntBASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 MTCO2P19-201ENST00000427513 598 ntBASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 RPS26P4-201ENST00000431743 355 ntBASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 AL121601.2-201ENST00000438019 707 ntBASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 AP000281.1-201ENST00000444036 316 ntBASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 AC073909.1-201ENST00000447112 999 ntBASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 AL359385.1-201ENST00000456509 365 ntBASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 snoU13.29-201ENST00000459370 104 ntBASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 OR5G4P-201ENST00000525251 760 ntBASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 AC027544.3-201ENST00000535082 757 ntBASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 NPM1P5-201ENST00000557228 838 ntBASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 AP002906.1-201ENST00000603405 233 ntBASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 MIR6862-1-201ENST00000613016 70 ntBASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 MIR6862-2-201ENST00000614755 70 ntBASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 ZNF663P-202ENST00000641770 1131 ntBASIC5.93□□□□□ -1.46
CDK5RAP1Q96SZ6 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms