Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AP001324.1-201ENST00000428553 399 ntBASIC5.65□□□□□ -1.51
SNED1Q8TER0 SNORA84-201ENST00000459229 133 ntBASIC5.65□□□□□ -1.51
SNED1Q8TER0 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.65□□□□□ -1.51
SNED1Q8TER0 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.65□□□□□ -1.51
SNED1Q8TER0 AC021733.2-201ENST00000518830 497 ntBASIC5.65□□□□□ -1.51
SNED1Q8TER0 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.65□□□□□ -1.51
SNED1Q8TER0 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SNED1Q8TER0 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.65□□□□□ -1.51
SNED1Q8TER0 FKBP1BP1-201ENST00000553366 325 ntBASIC5.65□□□□□ -1.51
SNED1Q8TER0 ARF4P1-201ENST00000605447 541 ntBASIC5.65□□□□□ -1.51
SNED1Q8TER0 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.65□□□□□ -1.51
SNED1Q8TER0 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SNED1Q8TER0 ICE2P1-201ENST00000512800 1849 ntBASIC5.64□□□□□ -1.51
SNED1Q8TER0 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SNED1Q8TER0 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
SNED1Q8TER0 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SNED1Q8TER0 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
SNED1Q8TER0 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SNED1Q8TER0 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SNED1Q8TER0 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SNED1Q8TER0 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SNED1Q8TER0 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.64□□□□□ -1.51
SNED1Q8TER0 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.64□□□□□ -1.51
SNED1Q8TER0 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SNED1Q8TER0 RPL7P58-201ENST00000402913 758 ntBASIC5.64□□□□□ -1.51
SNED1Q8TER0 AL445189.1-201ENST00000405722 338 ntBASIC5.64□□□□□ -1.51
SNED1Q8TER0 AC009506.2-201ENST00000420635 840 ntBASIC5.64□□□□□ -1.51
SNED1Q8TER0 CYCSP24-201ENST00000445119 316 ntBASIC5.64□□□□□ -1.51
SNED1Q8TER0 PHBP16-201ENST00000446318 950 ntBASIC5.64□□□□□ -1.51
SNED1Q8TER0 SEPT14P1-201ENST00000458703 648 ntBASIC5.64□□□□□ -1.51
SNED1Q8TER0 UQCRHP4-201ENST00000471686 272 ntBASIC5.64□□□□□ -1.51
SNED1Q8TER0 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.64□□□□□ -1.51
SNED1Q8TER0 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.64□□□□□ -1.51
SNED1Q8TER0 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.64□□□□□ -1.51
SNED1Q8TER0 PSMB7P1-201ENST00000556349 514 ntBASIC5.64□□□□□ -1.51
SNED1Q8TER0 TMF1P1-201ENST00000576058 373 ntBASIC5.64□□□□□ -1.51
SNED1Q8TER0 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.64□□□□□ -1.51
SNED1Q8TER0 OR7A19P-201ENST00000608051 733 ntBASIC5.64□□□□□ -1.51
SNED1Q8TER0 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.64□□□□□ -1.51
SNED1Q8TER0 AP005019.3-201ENST00000620418 560 ntBASIC5.64□□□□□ -1.51
SNED1Q8TER0 AL121950.1-201ENST00000624993 2077 ntBASIC5.64□□□□□ -1.51
SNED1Q8TER0 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SNED1Q8TER0 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.63□□□□□ -1.51
SNED1Q8TER0 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
SNED1Q8TER0 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.63□□□□□ -1.51
SNED1Q8TER0 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SNED1Q8TER0 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.63□□□□□ -1.51
SNED1Q8TER0 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.63□□□□□ -1.51
SNED1Q8TER0 AC090017.1-201ENST00000548612 1779 ntBASIC5.63□□□□□ -1.51
SNED1Q8TER0 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SNED1Q8TER0 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
SNED1Q8TER0 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SNED1Q8TER0 RN7SKP224-201ENST00000364140 325 ntBASIC5.63□□□□□ -1.51
SNED1Q8TER0 SDHCP2-201ENST00000398565 501 ntBASIC5.63□□□□□ -1.51
SNED1Q8TER0 OR8G2P-201ENST00000412796 908 ntBASIC5.63□□□□□ -1.51
SNED1Q8TER0 RAB9AP4-201ENST00000415230 609 ntBASIC5.63□□□□□ -1.51
SNED1Q8TER0 AL139095.3-201ENST00000419672 1203 ntBASIC5.63□□□□□ -1.51
SNED1Q8TER0 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.63□□□□□ -1.51
SNED1Q8TER0 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.63□□□□□ -1.51
SNED1Q8TER0 AC022034.3-201ENST00000471393 478 ntBASIC5.63□□□□□ -1.51
SNED1Q8TER0 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.63□□□□□ -1.51
SNED1Q8TER0 ACTR6P1-201ENST00000514311 1104 ntBASIC5.63□□□□□ -1.51
SNED1Q8TER0 AC105031.1-201ENST00000518550 476 ntBASIC5.63□□□□□ -1.51
SNED1Q8TER0 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC5.63□□□□□ -1.51
SNED1Q8TER0 AC022784.5-201ENST00000522241 437 ntBASIC5.63□□□□□ -1.51
SNED1Q8TER0 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.63□□□□□ -1.51
SNED1Q8TER0 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.63□□□□□ -1.51
SNED1Q8TER0 AC022916.3-201ENST00000592961 742 ntBASIC5.63□□□□□ -1.51
SNED1Q8TER0 AC008785.1-201ENST00000624475 456 ntBASIC5.63□□□□□ -1.51
SNED1Q8TER0 MIR3653-201ENST00000625572 110 ntBASIC5.63□□□□□ -1.51
SNED1Q8TER0 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SNED1Q8TER0 CASC19-255ENST00000641733 1385 ntBASIC5.63□□□□□ -1.51
SNED1Q8TER0 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SNED1Q8TER0 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SNED1Q8TER0 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SNED1Q8TER0 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
SNED1Q8TER0 AC073136.1-201ENST00000449426 2884 ntBASIC5.62□□□□□ -1.51
SNED1Q8TER0 AP002512.4-202ENST00000641599 4530 ntBASIC5.62□□□□□ -1.51
SNED1Q8TER0 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SNED1Q8TER0 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SNED1Q8TER0 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SNED1Q8TER0 RNA5SP171-201ENST00000391071 115 ntBASIC5.62□□□□□ -1.51
SNED1Q8TER0 AL022722.2-201ENST00000402519 180 ntBASIC5.62□□□□□ -1.51
SNED1Q8TER0 AMZ2P2-201ENST00000406819 1057 ntBASIC5.62□□□□□ -1.51
SNED1Q8TER0 U3.35-201ENST00000408405 208 ntBASIC5.62□□□□□ -1.51
SNED1Q8TER0 PCNPP4-201ENST00000414817 517 ntBASIC5.62□□□□□ -1.51
SNED1Q8TER0 TMBIM7P-201ENST00000418074 855 ntBASIC5.62□□□□□ -1.51
SNED1Q8TER0 AC092162.1-201ENST00000432828 434 ntBASIC5.62□□□□□ -1.51
SNED1Q8TER0 RPL35AP21-201ENST00000437667 333 ntBASIC5.62□□□□□ -1.51
SNED1Q8TER0 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.62□□□□□ -1.51
SNED1Q8TER0 DHFRP3-201ENST00000455595 559 ntBASIC5.62□□□□□ -1.51
SNED1Q8TER0 AC090142.1-201ENST00000465776 462 ntBASIC5.62□□□□□ -1.51
SNED1Q8TER0 AC053481.1-201ENST00000467217 306 ntBASIC5.62□□□□□ -1.51
SNED1Q8TER0 AC090589.1-201ENST00000473109 362 ntBASIC5.62□□□□□ -1.51
SNED1Q8TER0 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.62□□□□□ -1.51
SNED1Q8TER0 AC093815.1-201ENST00000508637 280 ntBASIC5.62□□□□□ -1.51
SNED1Q8TER0 MED28P5-201ENST00000528254 438 ntBASIC5.62□□□□□ -1.51
SNED1Q8TER0 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SNED1Q8TER0 MIR4660-201ENST00000583549 74 ntBASIC5.62□□□□□ -1.51
SNED1Q8TER0 MIR6891-201ENST00000618788 93 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms