Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 RPL32P33-201ENST00000487023 394 ntBASIC5.49□□□□□ -1.53
KRT78Q8N1N4 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 IGLV3-30-201ENST00000524362 298 ntBASIC5.49□□□□□ -1.53
KRT78Q8N1N4 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 AC023813.2-201ENST00000564321 469 ntBASIC5.49□□□□□ -1.53
KRT78Q8N1N4 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 AC123786.2-201ENST00000603459 275 ntBASIC5.49□□□□□ -1.53
KRT78Q8N1N4 AC016877.3-201ENST00000606778 504 ntBASIC5.49□□□□□ -1.53
KRT78Q8N1N4 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 AL096712.1-201ENST00000614561 159 ntBASIC5.49□□□□□ -1.53
KRT78Q8N1N4 AC079395.3-201ENST00000615161 484 ntBASIC5.49□□□□□ -1.53
KRT78Q8N1N4 RNA5SP439-201ENST00000617595 124 ntBASIC5.49□□□□□ -1.53
KRT78Q8N1N4 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 AC129915.3-201ENST00000634128 948 ntBASIC5.49□□□□□ -1.53
KRT78Q8N1N4 AC079776.5-201ENST00000641920 211 ntBASIC5.49□□□□□ -1.53
KRT78Q8N1N4 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
KRT78Q8N1N4 AC106872.5-201ENST00000508856 1416 ntBASIC5.48□□□□□ -1.53
KRT78Q8N1N4 SGO1P1-201ENST00000603525 1447 ntBASIC5.48□□□□□ -1.53
KRT78Q8N1N4 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.48□□□□□ -1.53
KRT78Q8N1N4 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
KRT78Q8N1N4 AP000473.2-201ENST00000602659 1537 ntBASIC5.48□□□□□ -1.53
KRT78Q8N1N4 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.48□□□□□ -1.53
KRT78Q8N1N4 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
KRT78Q8N1N4 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
KRT78Q8N1N4 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRT78Q8N1N4 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRT78Q8N1N4 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
KRT78Q8N1N4 AL159987.1-201ENST00000347911 293 ntBASIC5.48□□□□□ -1.53
KRT78Q8N1N4 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
KRT78Q8N1N4 NACA3P-201ENST00000359690 648 ntBASIC5.48□□□□□ -1.53
KRT78Q8N1N4 MIR375-201ENST00000362103 64 ntBASIC5.48□□□□□ -1.53
KRT78Q8N1N4 RNU6-413P-201ENST00000384115 107 ntBASIC5.48□□□□□ -1.53
KRT78Q8N1N4 MIR621-201ENST00000384919 96 ntBASIC5.48□□□□□ -1.53
KRT78Q8N1N4 AC087752.1-201ENST00000391360 558 ntBASIC5.48□□□□□ -1.53
KRT78Q8N1N4 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
KRT78Q8N1N4 HMGN1P20-201ENST00000411849 300 ntBASIC5.48□□□□□ -1.53
KRT78Q8N1N4 AC245060.4-201ENST00000413293 1121 ntBASIC5.48□□□□□ -1.53
KRT78Q8N1N4 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
KRT78Q8N1N4 AC009302.1-201ENST00000417147 390 ntBASIC5.48□□□□□ -1.53
KRT78Q8N1N4 RPL22P18-201ENST00000417197 377 ntBASIC5.48□□□□□ -1.53
KRT78Q8N1N4 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.48□□□□□ -1.53
KRT78Q8N1N4 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
KRT78Q8N1N4 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.48□□□□□ -1.53
KRT78Q8N1N4 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.48□□□□□ -1.53
KRT78Q8N1N4 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.48□□□□□ -1.53
KRT78Q8N1N4 CETN4P-201ENST00000432407 469 ntBASIC5.48□□□□□ -1.53
KRT78Q8N1N4 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
KRT78Q8N1N4 NANOGP2-201ENST00000435391 727 ntBASIC5.48□□□□□ -1.53
KRT78Q8N1N4 GAPDHP48-201ENST00000436626 961 ntBASIC5.48□□□□□ -1.53
KRT78Q8N1N4 DNAJA1P5-201ENST00000440278 943 ntBASIC5.48□□□□□ -1.53
KRT78Q8N1N4 ELOCP10-201ENST00000440624 327 ntBASIC5.48□□□□□ -1.53
KRT78Q8N1N4 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
KRT78Q8N1N4 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.48□□□□□ -1.53
KRT78Q8N1N4 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.48□□□□□ -1.53
KRT78Q8N1N4 MRPL35P4-201ENST00000453682 566 ntBASIC5.48□□□□□ -1.53
KRT78Q8N1N4 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
KRT78Q8N1N4 AC011476.1-201ENST00000466725 307 ntBASIC5.48□□□□□ -1.53
KRT78Q8N1N4 AC006511.1-201ENST00000470614 315 ntBASIC5.48□□□□□ -1.53
KRT78Q8N1N4 AC009120.1-201ENST00000493458 473 ntBASIC5.48□□□□□ -1.53
KRT78Q8N1N4 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.48□□□□□ -1.53
KRT78Q8N1N4 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.48□□□□□ -1.53
KRT78Q8N1N4 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.48□□□□□ -1.53
KRT78Q8N1N4 OR8Q1P-201ENST00000526467 655 ntBASIC5.48□□□□□ -1.53
KRT78Q8N1N4 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.48□□□□□ -1.53
KRT78Q8N1N4 OR5AM1P-201ENST00000532136 1032 ntBASIC5.48□□□□□ -1.53
KRT78Q8N1N4 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.48□□□□□ -1.53
KRT78Q8N1N4 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.48□□□□□ -1.53
KRT78Q8N1N4 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.48□□□□□ -1.53
KRT78Q8N1N4 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.48□□□□□ -1.53
KRT78Q8N1N4 PCNAP1-202ENST00000595299 752 ntBASIC5.48□□□□□ -1.53
KRT78Q8N1N4 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.48□□□□□ -1.53
KRT78Q8N1N4 VN1R83P-201ENST00000595685 445 ntBASIC5.48□□□□□ -1.53
KRT78Q8N1N4 AC245036.5-201ENST00000596330 847 ntBASIC5.48□□□□□ -1.53
KRT78Q8N1N4 NIFKP6-201ENST00000598115 845 ntBASIC5.48□□□□□ -1.53
KRT78Q8N1N4 ELOCP34-201ENST00000604436 327 ntBASIC5.48□□□□□ -1.53
KRT78Q8N1N4 AL392112.1-201ENST00000605115 829 ntBASIC5.48□□□□□ -1.53
KRT78Q8N1N4 AC108865.2-201ENST00000606881 432 ntBASIC5.48□□□□□ -1.53
KRT78Q8N1N4 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.48□□□□□ -1.53
KRT78Q8N1N4 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.48□□□□□ -1.53
KRT78Q8N1N4 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.48□□□□□ -1.53
KRT78Q8N1N4 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
KRT78Q8N1N4 AL162574.1-201ENST00000615702 950 ntBASIC5.48□□□□□ -1.53
KRT78Q8N1N4 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.48□□□□□ -1.53
KRT78Q8N1N4 AL390318.1-201ENST00000624564 687 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms