Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS13CQ709C8 ZNF285B-201ENST00000561698 1767 ntBASIC3.62□□□□□ -1.83
VPS13CQ709C8 MIR7853-201ENST00000584820 132 ntBASIC3.62□□□□□ -1.83
VPS13CQ709C8 ADAD1P2-201ENST00000588476 646 ntBASIC3.62□□□□□ -1.83
VPS13CQ709C8 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS13CQ709C8 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS13CQ709C8 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS13CQ709C8 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC3.62□□□□□ -1.83
VPS13CQ709C8 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
VPS13CQ709C8 TEK-205ENST00000615002 4666 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS13CQ709C8 SORBS2-201ENST00000284776 5996 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VPS13CQ709C8 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS13CQ709C8 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
VPS13CQ709C8 RPL21P17-201ENST00000397467 475 ntBASIC3.61□□□□□ -1.83
VPS13CQ709C8 COX5BP7-201ENST00000414780 274 ntBASIC3.61□□□□□ -1.83
VPS13CQ709C8 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.61□□□□□ -1.83
VPS13CQ709C8 PDSS1P1-201ENST00000422953 1114 ntBASIC3.61□□□□□ -1.83
VPS13CQ709C8 AC023632.4-201ENST00000517783 191 ntBASIC3.61□□□□□ -1.83
VPS13CQ709C8 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS13CQ709C8 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC3.61□□□□□ -1.83
VPS13CQ709C8 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS13CQ709C8 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS13CQ709C8 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VPS13CQ709C8 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.61□□□□□ -1.83
VPS13CQ709C8 TBC1D30-204ENST00000542120 7433 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VPS13CQ709C8 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VPS13CQ709C8 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS13CQ709C8 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS13CQ709C8 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS13CQ709C8 RNU1-14P-201ENST00000362759 152 ntBASIC3.61□□□□□ -1.83
VPS13CQ709C8 MTND4LP17-201ENST00000414607 293 ntBASIC3.61□□□□□ -1.83
VPS13CQ709C8 AL157831.1-201ENST00000426134 473 ntBASIC3.61□□□□□ -1.83
VPS13CQ709C8 AC005868.1-201ENST00000536421 331 ntBASIC3.61□□□□□ -1.83
VPS13CQ709C8 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS13CQ709C8 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.61□□□□□ -1.83
VPS13CQ709C8 AC090912.3-201ENST00000609775 533 ntBASIC3.61□□□□□ -1.83
VPS13CQ709C8 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VPS13CQ709C8 AL672167.1-204ENST00000641875 3017 ntBASIC3.61□□□□□ -1.83
VPS13CQ709C8 TAF1L-201ENST00000242310 6216 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
VPS13CQ709C8 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC3.61□□□□□ -1.83
VPS13CQ709C8 TRIM51GP-201ENST00000534741 1350 ntBASIC3.61□□□□□ -1.83
VPS13CQ709C8 MIR7-3-201ENST00000384898 110 ntBASIC3.61□□□□□ -1.83
VPS13CQ709C8 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS13CQ709C8 EIF4A1P3-201ENST00000411521 244 ntBASIC3.61□□□□□ -1.83
VPS13CQ709C8 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS13CQ709C8 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS13CQ709C8 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS13CQ709C8 RN7SL323P-201ENST00000494712 295 ntBASIC3.61□□□□□ -1.83
VPS13CQ709C8 TMEM30CP-203ENST00000637814 1035 ntBASIC3.61□□□□□ -1.83
VPS13CQ709C8 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS13CQ709C8 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS13CQ709C8 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VPS13CQ709C8 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC3.61□□□□□ -1.83
VPS13CQ709C8 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS13CQ709C8 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VPS13CQ709C8 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS13CQ709C8 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
VPS13CQ709C8 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS13CQ709C8 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS13CQ709C8 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS13CQ709C8 AC104978.1-201ENST00000449387 391 ntBASIC3.6□□□□□ -1.83
VPS13CQ709C8 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.6□□□□□ -1.83
VPS13CQ709C8 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.6□□□□□ -1.83
VPS13CQ709C8 AC096553.1-201ENST00000605169 829 ntBASIC3.6□□□□□ -1.83
VPS13CQ709C8 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS13CQ709C8 AC084757.4-201ENST00000616350 526 ntBASIC3.6□□□□□ -1.83
VPS13CQ709C8 MIR3653-201ENST00000625572 110 ntBASIC3.6□□□□□ -1.83
VPS13CQ709C8 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.6□□□□□ -1.83
VPS13CQ709C8 PRNCR1-201ENST00000635449 12727 ntBASIC3.6□□□□□ -1.83
VPS13CQ709C8 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VPS13CQ709C8 AP000542.3-201ENST00000623391 6114 ntBASIC3.6□□□□□ -1.83
VPS13CQ709C8 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS13CQ709C8 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
VPS13CQ709C8 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS13CQ709C8 RPEP2-201ENST00000432149 701 ntBASIC3.6□□□□□ -1.83
VPS13CQ709C8 AC138761.5-201ENST00000433967 325 ntBASIC3.6□□□□□ -1.83
VPS13CQ709C8 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS13CQ709C8 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS13CQ709C8 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VPS13CQ709C8 SCARNA14-201ENST00000516903 136 ntBASIC3.6□□□□□ -1.83
VPS13CQ709C8 AP003730.1-201ENST00000524605 285 ntBASIC3.6□□□□□ -1.83
VPS13CQ709C8 AP000619.3-201ENST00000535634 1127 ntBASIC3.6□□□□□ -1.83
VPS13CQ709C8 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
VPS13CQ709C8 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
VPS13CQ709C8 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VPS13CQ709C8 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
VPS13CQ709C8 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
VPS13CQ709C8 AC009779.8-201ENST00000641684 4384 ntBASIC3.6□□□□□ -1.83
VPS13CQ709C8 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VPS13CQ709C8 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VPS13CQ709C8 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
VPS13CQ709C8 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
VPS13CQ709C8 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS13CQ709C8 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS13CQ709C8 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS13CQ709C8 AC023271.1-201ENST00000445936 1090 ntBASIC3.6□□□□□ -1.83
VPS13CQ709C8 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS13CQ709C8 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS13CQ709C8 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.6□□□□□ -1.83
VPS13CQ709C8 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms