Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC020656.2-201ENST00000613291 5309 ntBASIC5.47□□□□□ -1.53
RNF220Q5VTB9 AC012254.3-201ENST00000591183 2117 ntBASIC5.47□□□□□ -1.53
RNF220Q5VTB9 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
RNF220Q5VTB9 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.47□□□□□ -1.53
RNF220Q5VTB9 AL512646.1-201ENST00000269395 1077 ntBASIC5.47□□□□□ -1.53
RNF220Q5VTB9 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RNF220Q5VTB9 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RNF220Q5VTB9 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RNF220Q5VTB9 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
RNF220Q5VTB9 SFR1P1-201ENST00000403720 688 ntBASIC5.47□□□□□ -1.53
RNF220Q5VTB9 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.47□□□□□ -1.53
RNF220Q5VTB9 RNU2-65P-201ENST00000410162 185 ntBASIC5.47□□□□□ -1.53
RNF220Q5VTB9 ELOCP9-201ENST00000418624 239 ntBASIC5.47□□□□□ -1.53
RNF220Q5VTB9 THEM7P-201ENST00000419556 672 ntBASIC5.47□□□□□ -1.53
RNF220Q5VTB9 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.47□□□□□ -1.53
RNF220Q5VTB9 GAPDHP59-201ENST00000435908 267 ntBASIC5.47□□□□□ -1.53
RNF220Q5VTB9 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
RNF220Q5VTB9 GTF2IP7-202ENST00000436677 309 ntBASIC5.47□□□□□ -1.53
RNF220Q5VTB9 DNAJA1P5-201ENST00000440278 943 ntBASIC5.47□□□□□ -1.53
RNF220Q5VTB9 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.47□□□□□ -1.53
RNF220Q5VTB9 AL445466.1-201ENST00000448432 357 ntBASIC5.47□□□□□ -1.53
RNF220Q5VTB9 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.47□□□□□ -1.53
RNF220Q5VTB9 AC092865.4-201ENST00000477936 615 ntBASIC5.47□□□□□ -1.53
RNF220Q5VTB9 AC098818.1-201ENST00000478593 252 ntBASIC5.47□□□□□ -1.53
RNF220Q5VTB9 AC004263.1-201ENST00000479327 332 ntBASIC5.47□□□□□ -1.53
RNF220Q5VTB9 RPL7P6-201ENST00000480903 738 ntBASIC5.47□□□□□ -1.53
RNF220Q5VTB9 RN7SL612P-201ENST00000497704 295 ntBASIC5.47□□□□□ -1.53
RNF220Q5VTB9 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.47□□□□□ -1.53
RNF220Q5VTB9 AC034244.1-201ENST00000507687 207 ntBASIC5.47□□□□□ -1.53
RNF220Q5VTB9 AC008494.2-201ENST00000514544 370 ntBASIC5.47□□□□□ -1.53
RNF220Q5VTB9 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.47□□□□□ -1.53
RNF220Q5VTB9 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.47□□□□□ -1.53
RNF220Q5VTB9 AC116917.1-201ENST00000520558 305 ntBASIC5.47□□□□□ -1.53
RNF220Q5VTB9 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC5.47□□□□□ -1.53
RNF220Q5VTB9 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.47□□□□□ -1.53
RNF220Q5VTB9 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.47□□□□□ -1.53
RNF220Q5VTB9 AP003033.2-201ENST00000528901 805 ntBASIC5.47□□□□□ -1.53
RNF220Q5VTB9 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RNF220Q5VTB9 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RNF220Q5VTB9 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.47□□□□□ -1.53
RNF220Q5VTB9 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.47□□□□□ -1.53
RNF220Q5VTB9 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.47□□□□□ -1.53
RNF220Q5VTB9 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.47□□□□□ -1.53
RNF220Q5VTB9 AC002519.2-203ENST00000567043 837 ntBASIC5.47□□□□□ -1.53
RNF220Q5VTB9 AC022662.1-201ENST00000580252 331 ntBASIC5.47□□□□□ -1.53
RNF220Q5VTB9 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC5.47□□□□□ -1.53
RNF220Q5VTB9 AP005262.1-201ENST00000582646 997 ntBASIC5.47□□□□□ -1.53
RNF220Q5VTB9 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.47□□□□□ -1.53
RNF220Q5VTB9 AL137072.1-201ENST00000603444 466 ntBASIC5.47□□□□□ -1.53
RNF220Q5VTB9 AC010200.2-201ENST00000605098 235 ntBASIC5.47□□□□□ -1.53
RNF220Q5VTB9 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.47□□□□□ -1.53
RNF220Q5VTB9 AC004908.3-201ENST00000610248 625 ntBASIC5.47□□□□□ -1.53
RNF220Q5VTB9 uc_338.31-201ENST00000615595 186 ntBASIC5.47□□□□□ -1.53
RNF220Q5VTB9 AC005840.5-201ENST00000619166 599 ntBASIC5.47□□□□□ -1.53
RNF220Q5VTB9 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.47□□□□□ -1.53
RNF220Q5VTB9 MTND2P41-201ENST00000637599 773 ntBASIC5.47□□□□□ -1.53
RNF220Q5VTB9 OR2L1P-202ENST00000641567 1023 ntBASIC5.47□□□□□ -1.53
RNF220Q5VTB9 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
RNF220Q5VTB9 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
RNF220Q5VTB9 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
RNF220Q5VTB9 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.47□□□□□ -1.53
RNF220Q5VTB9 AL034549.2-201ENST00000618285 3373 ntBASIC5.47□□□□□ -1.53
RNF220Q5VTB9 AC134882.1-201ENST00000603738 1676 ntBASIC5.47□□□□□ -1.53
RNF220Q5VTB9 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RNF220Q5VTB9 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RNF220Q5VTB9 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
RNF220Q5VTB9 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
RNF220Q5VTB9 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RNF220Q5VTB9 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.46□□□□□ -1.54
RNF220Q5VTB9 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RNF220Q5VTB9 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RNF220Q5VTB9 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RNF220Q5VTB9 SNORD116.1-201ENST00000365628 92 ntBASIC5.46□□□□□ -1.54
RNF220Q5VTB9 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
RNF220Q5VTB9 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
RNF220Q5VTB9 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RNF220Q5VTB9 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RNF220Q5VTB9 GSTA8P-201ENST00000404253 637 ntBASIC5.46□□□□□ -1.54
RNF220Q5VTB9 AL590084.1-201ENST00000407885 387 ntBASIC5.46□□□□□ -1.54
RNF220Q5VTB9 RNU2-50P-201ENST00000410494 143 ntBASIC5.46□□□□□ -1.54
RNF220Q5VTB9 AC002524.1-201ENST00000411687 547 ntBASIC5.46□□□□□ -1.54
RNF220Q5VTB9 AC107081.1-201ENST00000414975 361 ntBASIC5.46□□□□□ -1.54
RNF220Q5VTB9 NPM1P24-201ENST00000428039 894 ntBASIC5.46□□□□□ -1.54
RNF220Q5VTB9 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.46□□□□□ -1.54
RNF220Q5VTB9 AL445928.1-201ENST00000435545 222 ntBASIC5.46□□□□□ -1.54
RNF220Q5VTB9 AC023141.3-201ENST00000436698 278 ntBASIC5.46□□□□□ -1.54
RNF220Q5VTB9 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.46□□□□□ -1.54
RNF220Q5VTB9 HMGB1P16-201ENST00000447155 540 ntBASIC5.46□□□□□ -1.54
RNF220Q5VTB9 AC097463.1-201ENST00000447288 481 ntBASIC5.46□□□□□ -1.54
RNF220Q5VTB9 HMGB1P7-201ENST00000450921 612 ntBASIC5.46□□□□□ -1.54
RNF220Q5VTB9 AURKAPS1-201ENST00000451805 1212 ntBASIC5.46□□□□□ -1.54
RNF220Q5VTB9 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.46□□□□□ -1.54
RNF220Q5VTB9 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC5.46□□□□□ -1.54
RNF220Q5VTB9 TCP11X3P-202ENST00000514289 1254 ntBASIC5.46□□□□□ -1.54
RNF220Q5VTB9 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.46□□□□□ -1.54
RNF220Q5VTB9 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.46□□□□□ -1.54
RNF220Q5VTB9 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.46□□□□□ -1.54
RNF220Q5VTB9 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.46□□□□□ -1.54
RNF220Q5VTB9 AP001317.1-201ENST00000531194 960 ntBASIC5.46□□□□□ -1.54
RNF220Q5VTB9 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms