Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC8.09□□□□□ -1.11
VARS2Q5ST30 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC8.09□□□□□ -1.11
VARS2Q5ST30 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC8.09□□□□□ -1.11
VARS2Q5ST30 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC8.09□□□□□ -1.11
VARS2Q5ST30 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC8.09□□□□□ -1.11
VARS2Q5ST30 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC8.09□□□□□ -1.11
VARS2Q5ST30 AC012433.1-201ENST00000588916 398 ntBASIC8.09□□□□□ -1.11
VARS2Q5ST30 Z98751.3-201ENST00000604447 521 ntBASIC8.09□□□□□ -1.11
VARS2Q5ST30 AL096855.2-201ENST00000605785 369 ntBASIC8.09□□□□□ -1.11
VARS2Q5ST30 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC8.09□□□□□ -1.11
VARS2Q5ST30 Six3os1_2.1-201ENST00000616963 217 ntBASIC8.09□□□□□ -1.11
VARS2Q5ST30 MIAT_exon1.1-201ENST00000617016 135 ntBASIC8.09□□□□□ -1.11
VARS2Q5ST30 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC8.09□□□□□ -1.11
VARS2Q5ST30 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC8.09□□□□□ -1.11
VARS2Q5ST30 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC8.09□□□□□ -1.11
VARS2Q5ST30 MIR193BHG-214ENST00000641765 509 ntBASIC8.09□□□□□ -1.11
VARS2Q5ST30 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
VARS2Q5ST30 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
VARS2Q5ST30 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC8.09□□□□□ -1.11
VARS2Q5ST30 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
VARS2Q5ST30 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
VARS2Q5ST30 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC8.09□□□□□ -1.11
VARS2Q5ST30 RPS17-209ENST00000561157 1909 ntTSL 2 BASIC8.09□□□□□ -1.11
VARS2Q5ST30 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
VARS2Q5ST30 AC110998.1-201ENST00000519029 2053 ntBASIC8.09□□□□□ -1.11
VARS2Q5ST30 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
VARS2Q5ST30 ZNRD1ASP-211ENST00000376797 3270 ntTSL 2 BASIC8.09□□□□□ -1.11
VARS2Q5ST30 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
VARS2Q5ST30 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC8.09□□□□□ -1.12
VARS2Q5ST30 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
VARS2Q5ST30 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
VARS2Q5ST30 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
VARS2Q5ST30 LMLN-202ENST00000332636 1812 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
VARS2Q5ST30 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
VARS2Q5ST30 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
VARS2Q5ST30 PSMC1P7-201ENST00000495689 1315 ntBASIC8.08□□□□□ -1.12
VARS2Q5ST30 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC8.08□□□□□ -1.12
VARS2Q5ST30 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
VARS2Q5ST30 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
VARS2Q5ST30 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
VARS2Q5ST30 AC016251.1-201ENST00000624299 4198 ntBASIC8.08□□□□□ -1.12
VARS2Q5ST30 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC8.08□□□□□ -1.12
VARS2Q5ST30 PGRMC2-202ENST00000394276 2858 ntTSL 2 BASIC8.08□□□□□ -1.12
VARS2Q5ST30 RNA5SP260-201ENST00000363849 111 ntBASIC8.08□□□□□ -1.12
VARS2Q5ST30 RNU4-1-201ENST00000363925 141 ntBASIC8.08□□□□□ -1.12
VARS2Q5ST30 Y_RNA.276-201ENST00000364732 109 ntBASIC8.08□□□□□ -1.12
VARS2Q5ST30 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
VARS2Q5ST30 ARMCX7P-201ENST00000372828 562 ntBASIC8.08□□□□□ -1.12
VARS2Q5ST30 Y_RNA.539-201ENST00000384635 107 ntBASIC8.08□□□□□ -1.12
VARS2Q5ST30 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
VARS2Q5ST30 AC110754.1-201ENST00000399740 601 ntBASIC8.08□□□□□ -1.12
VARS2Q5ST30 AC105052.2-201ENST00000434317 794 ntBASIC8.08□□□□□ -1.12
VARS2Q5ST30 AC079781.2-201ENST00000446424 169 ntBASIC8.08□□□□□ -1.12
VARS2Q5ST30 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
VARS2Q5ST30 PRPF38AP1-201ENST00000451976 933 ntBASIC8.08□□□□□ -1.12
VARS2Q5ST30 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC8.08□□□□□ -1.12
VARS2Q5ST30 AC008620.1-201ENST00000468453 592 ntBASIC8.08□□□□□ -1.12
VARS2Q5ST30 RN7SL233P-201ENST00000469988 277 ntBASIC8.08□□□□□ -1.12
VARS2Q5ST30 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC8.08□□□□□ -1.12
VARS2Q5ST30 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
VARS2Q5ST30 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC8.08□□□□□ -1.12
VARS2Q5ST30 MRPS5P3-201ENST00000515577 166 ntBASIC8.08□□□□□ -1.12
VARS2Q5ST30 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC8.08□□□□□ -1.12
VARS2Q5ST30 ATP5J2P4-201ENST00000538774 267 ntBASIC8.08□□□□□ -1.12
VARS2Q5ST30 COX4I1P1-201ENST00000554239 509 ntBASIC8.08□□□□□ -1.12
VARS2Q5ST30 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC8.08□□□□□ -1.12
VARS2Q5ST30 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC8.08□□□□□ -1.12
VARS2Q5ST30 AC084783.1-201ENST00000565846 910 ntBASIC8.08□□□□□ -1.12
VARS2Q5ST30 CYP4A44P-201ENST00000569984 154 ntBASIC8.08□□□□□ -1.12
VARS2Q5ST30 AP001029.3-201ENST00000588063 596 ntBASIC8.08□□□□□ -1.12
VARS2Q5ST30 AL512329.2-201ENST00000607350 548 ntBASIC8.08□□□□□ -1.12
VARS2Q5ST30 AC063962.1-201ENST00000608199 521 ntBASIC8.08□□□□□ -1.12
VARS2Q5ST30 AC093635.1-201ENST00000609028 555 ntBASIC8.08□□□□□ -1.12
VARS2Q5ST30 AL022238.3-201ENST00000609279 443 ntBASIC8.08□□□□□ -1.12
VARS2Q5ST30 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC8.08□□□□□ -1.12
VARS2Q5ST30 AC018445.2-201ENST00000622987 260 ntBASIC8.08□□□□□ -1.12
VARS2Q5ST30 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
VARS2Q5ST30 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
VARS2Q5ST30 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
VARS2Q5ST30 ALB-219ENST00000621085 1418 ntTSL 5 BASIC8.08□□□□□ -1.12
VARS2Q5ST30 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
VARS2Q5ST30 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
VARS2Q5ST30 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
VARS2Q5ST30 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
VARS2Q5ST30 AC011416.1-201ENST00000514947 1732 ntBASIC8.08□□□□□ -1.12
VARS2Q5ST30 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC8.08□□□□□ -1.12
VARS2Q5ST30 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC8.08□□□□□ -1.12
VARS2Q5ST30 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
VARS2Q5ST30 AC007012.2-201ENST00000623206 1676 ntBASIC8.08□□□□□ -1.12
VARS2Q5ST30 PARN-201ENST00000341484 2100 ntTSL 2 BASIC8.08□□□□□ -1.12
VARS2Q5ST30 AMYH02020865.1-201ENST00000621140 2591 ntTSL 2 BASIC8.08□□□□□ -1.12
VARS2Q5ST30 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
VARS2Q5ST30 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC8.07□□□□□ -1.12
VARS2Q5ST30 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC8.07□□□□□ -1.12
VARS2Q5ST30 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC8.07□□□□□ -1.12
VARS2Q5ST30 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC8.07□□□□□ -1.12
VARS2Q5ST30 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC8.07□□□□□ -1.12
VARS2Q5ST30 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC8.07□□□□□ -1.12
VARS2Q5ST30 SF3A3P1-201ENST00000446317 1477 ntBASIC8.07□□□□□ -1.12
VARS2Q5ST30 SCARB2-211ENST00000638603 4284 ntTSL 5 BASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms