Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.06□□□□□ -1.76
AP3S2P59780 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.06□□□□□ -1.76
AP3S2P59780 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
AP3S2P59780 AC135001.1-201ENST00000544546 283 ntBASIC4.06□□□□□ -1.76
AP3S2P59780 FKBP1BP1-201ENST00000553366 325 ntBASIC4.06□□□□□ -1.76
AP3S2P59780 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.06□□□□□ -1.76
AP3S2P59780 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.06□□□□□ -1.76
AP3S2P59780 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.06□□□□□ -1.76
AP3S2P59780 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC4.06□□□□□ -1.76
AP3S2P59780 AC069307.1-201ENST00000602820 447 ntBASIC4.06□□□□□ -1.76
AP3S2P59780 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.06□□□□□ -1.76
AP3S2P59780 AL353726.1-201ENST00000614041 1000 ntBASIC4.06□□□□□ -1.76
AP3S2P59780 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.06□□□□□ -1.76
AP3S2P59780 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
AP3S2P59780 AL353662.3-201ENST00000625131 237 ntBASIC4.06□□□□□ -1.76
AP3S2P59780 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.06□□□□□ -1.76
AP3S2P59780 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
AP3S2P59780 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
AP3S2P59780 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.06□□□□□ -1.76
AP3S2P59780 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.06□□□□□ -1.76
AP3S2P59780 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.05□□□□□ -1.76
AP3S2P59780 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
AP3S2P59780 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.05□□□□□ -1.76
AP3S2P59780 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
AP3S2P59780 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
AP3S2P59780 RN7SKP44-201ENST00000363602 316 ntBASIC4.05□□□□□ -1.76
AP3S2P59780 RNU4-7P-201ENST00000364758 141 ntBASIC4.05□□□□□ -1.76
AP3S2P59780 RNU1-43P-201ENST00000365052 165 ntBASIC4.05□□□□□ -1.76
AP3S2P59780 RHOT1P2-201ENST00000366423 333 ntBASIC4.05□□□□□ -1.76
AP3S2P59780 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
AP3S2P59780 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.05□□□□□ -1.76
AP3S2P59780 GCNT6-201ENST00000379591 934 ntBASIC4.05□□□□□ -1.76
AP3S2P59780 MIR93-201ENST00000385024 80 ntBASIC4.05□□□□□ -1.76
AP3S2P59780 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
AP3S2P59780 ARL4AP5-201ENST00000404372 599 ntBASIC4.05□□□□□ -1.76
AP3S2P59780 GABARAPL3-201ENST00000412799 354 ntBASIC4.05□□□□□ -1.76
AP3S2P59780 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.05□□□□□ -1.76
AP3S2P59780 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC4.05□□□□□ -1.76
AP3S2P59780 RPS17P8-201ENST00000434525 335 ntBASIC4.05□□□□□ -1.76
AP3S2P59780 AC002504.1-201ENST00000438281 691 ntBASIC4.05□□□□□ -1.76
AP3S2P59780 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC4.05□□□□□ -1.76
AP3S2P59780 OR52E7P-201ENST00000452394 933 ntBASIC4.05□□□□□ -1.76
AP3S2P59780 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.05□□□□□ -1.76
AP3S2P59780 AC100832.1-201ENST00000471945 383 ntBASIC4.05□□□□□ -1.76
AP3S2P59780 AC116562.1-201ENST00000485355 781 ntBASIC4.05□□□□□ -1.76
AP3S2P59780 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.05□□□□□ -1.76
AP3S2P59780 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.05□□□□□ -1.76
AP3S2P59780 SNORD116-26-201ENST00000516006 96 ntBASIC4.05□□□□□ -1.76
AP3S2P59780 RNU2-30P-201ENST00000516209 141 ntBASIC4.05□□□□□ -1.76
AP3S2P59780 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC4.05□□□□□ -1.76
AP3S2P59780 AC090281.1-201ENST00000523019 276 ntBASIC4.05□□□□□ -1.76
AP3S2P59780 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
AP3S2P59780 AC006512.2-201ENST00000543250 486 ntBASIC4.05□□□□□ -1.76
AP3S2P59780 AC010547.6-201ENST00000571789 193 ntBASIC4.05□□□□□ -1.76
AP3S2P59780 MIR1273E-201ENST00000581165 102 ntBASIC4.05□□□□□ -1.76
AP3S2P59780 MIR4505-201ENST00000582238 73 ntBASIC4.05□□□□□ -1.76
AP3S2P59780 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.05□□□□□ -1.76
AP3S2P59780 AC008638.3-201ENST00000603341 463 ntBASIC4.05□□□□□ -1.76
AP3S2P59780 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.05□□□□□ -1.76
AP3S2P59780 AC090953.1-201ENST00000604305 1092 ntBASIC4.05□□□□□ -1.76
AP3S2P59780 AC004825.2-201ENST00000616634 455 ntBASIC4.05□□□□□ -1.76
AP3S2P59780 AC000123.2-201ENST00000623124 461 ntBASIC4.05□□□□□ -1.76
AP3S2P59780 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.05□□□□□ -1.76
AP3S2P59780 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
AP3S2P59780 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
AP3S2P59780 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
AP3S2P59780 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
AP3S2P59780 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.05□□□□□ -1.76
AP3S2P59780 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
AP3S2P59780 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.04□□□□□ -1.76
AP3S2P59780 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
AP3S2P59780 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
AP3S2P59780 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.04□□□□□ -1.76
AP3S2P59780 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
AP3S2P59780 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
AP3S2P59780 RNA5SP428-201ENST00000365129 132 ntBASIC4.04□□□□□ -1.76
AP3S2P59780 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
AP3S2P59780 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.04□□□□□ -1.76
AP3S2P59780 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
AP3S2P59780 AL357515.1-201ENST00000402967 542 ntBASIC4.04□□□□□ -1.76
AP3S2P59780 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.04□□□□□ -1.76
AP3S2P59780 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
AP3S2P59780 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
AP3S2P59780 RPL7P57-201ENST00000423238 740 ntBASIC4.04□□□□□ -1.76
AP3S2P59780 SKP1P3-201ENST00000429280 487 ntBASIC4.04□□□□□ -1.76
AP3S2P59780 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
AP3S2P59780 RPL12P28-201ENST00000430852 489 ntBASIC4.04□□□□□ -1.76
AP3S2P59780 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.04□□□□□ -1.76
AP3S2P59780 MAPRE1P3-201ENST00000435438 796 ntBASIC4.04□□□□□ -1.76
AP3S2P59780 AL353748.1-201ENST00000440753 474 ntBASIC4.04□□□□□ -1.76
AP3S2P59780 KNOP1P3-201ENST00000446933 426 ntBASIC4.04□□□□□ -1.76
AP3S2P59780 RPS27AP15-201ENST00000447672 466 ntBASIC4.04□□□□□ -1.76
AP3S2P59780 AC000111.2-201ENST00000448200 210 ntBASIC4.04□□□□□ -1.76
AP3S2P59780 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.04□□□□□ -1.76
AP3S2P59780 AL645939.1-201ENST00000453429 797 ntBASIC4.04□□□□□ -1.76
AP3S2P59780 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.04□□□□□ -1.76
AP3S2P59780 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC4.04□□□□□ -1.76
AP3S2P59780 RN7SL97P-201ENST00000486780 299 ntBASIC4.04□□□□□ -1.76
AP3S2P59780 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
AP3S2P59780 PSMA2P2-201ENST00000504319 686 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms