Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.39□□□□□ -1.71
CLDN18P56856 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.39□□□□□ -1.71
CLDN18P56856 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.39□□□□□ -1.71
CLDN18P56856 AC025857.1-201ENST00000525252 377 ntBASIC4.39□□□□□ -1.71
CLDN18P56856 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.39□□□□□ -1.71
CLDN18P56856 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLDN18P56856 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.39□□□□□ -1.71
CLDN18P56856 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.39□□□□□ -1.71
CLDN18P56856 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.39□□□□□ -1.71
CLDN18P56856 AL391358.1-201ENST00000605342 190 ntBASIC4.39□□□□□ -1.71
CLDN18P56856 AC010424.2-201ENST00000607594 443 ntBASIC4.39□□□□□ -1.71
CLDN18P56856 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.39□□□□□ -1.71
CLDN18P56856 AC243960.7-201ENST00000623532 707 ntBASIC4.39□□□□□ -1.71
CLDN18P56856 AC073342.3-201ENST00000624211 193 ntBASIC4.39□□□□□ -1.71
CLDN18P56856 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.39□□□□□ -1.71
CLDN18P56856 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLDN18P56856 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLDN18P56856 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLDN18P56856 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CLDN18P56856 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLDN18P56856 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.39□□□□□ -1.71
CLDN18P56856 AC011447.7-201ENST00000624228 1590 ntBASIC4.39□□□□□ -1.71
CLDN18P56856 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLDN18P56856 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLDN18P56856 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLDN18P56856 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.38□□□□□ -1.71
CLDN18P56856 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLDN18P56856 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CLDN18P56856 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CLDN18P56856 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CLDN18P56856 SMG1P6-201ENST00000532337 2930 ntBASIC4.38□□□□□ -1.71
CLDN18P56856 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLDN18P56856 AC008758.3-201ENST00000507003 1829 ntBASIC4.38□□□□□ -1.71
CLDN18P56856 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLDN18P56856 RPL10P10-201ENST00000403509 664 ntBASIC4.38□□□□□ -1.71
CLDN18P56856 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.38□□□□□ -1.71
CLDN18P56856 RN7SKP100-201ENST00000411258 284 ntBASIC4.38□□□□□ -1.71
CLDN18P56856 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.38□□□□□ -1.71
CLDN18P56856 OR5M12P-201ENST00000423388 929 ntBASIC4.38□□□□□ -1.71
CLDN18P56856 CYCSP24-201ENST00000445119 316 ntBASIC4.38□□□□□ -1.71
CLDN18P56856 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.38□□□□□ -1.71
CLDN18P56856 RNA5SP103-201ENST00000459503 118 ntBASIC4.38□□□□□ -1.71
CLDN18P56856 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.38□□□□□ -1.71
CLDN18P56856 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.38□□□□□ -1.71
CLDN18P56856 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.38□□□□□ -1.71
CLDN18P56856 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CLDN18P56856 HMGB1P19-201ENST00000517578 577 ntBASIC4.38□□□□□ -1.71
CLDN18P56856 CDH12P4-201ENST00000517835 295 ntBASIC4.38□□□□□ -1.71
CLDN18P56856 CDH12P3-201ENST00000517935 295 ntBASIC4.38□□□□□ -1.71
CLDN18P56856 CDH12P1-201ENST00000518435 295 ntBASIC4.38□□□□□ -1.71
CLDN18P56856 AC026688.1-201ENST00000520639 1168 ntBASIC4.38□□□□□ -1.71
CLDN18P56856 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.38□□□□□ -1.71
CLDN18P56856 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.38□□□□□ -1.71
CLDN18P56856 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.38□□□□□ -1.71
CLDN18P56856 AGGF1P9-201ENST00000561884 913 ntBASIC4.38□□□□□ -1.71
CLDN18P56856 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.38□□□□□ -1.71
CLDN18P56856 AC091042.1-201ENST00000579213 173 ntBASIC4.38□□□□□ -1.71
CLDN18P56856 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CLDN18P56856 AL512782.1-201ENST00000603093 364 ntBASIC4.38□□□□□ -1.71
CLDN18P56856 AC012213.4-201ENST00000606457 354 ntBASIC4.38□□□□□ -1.71
CLDN18P56856 AL137246.1-201ENST00000607072 977 ntBASIC4.38□□□□□ -1.71
CLDN18P56856 AC019131.2-201ENST00000609071 870 ntBASIC4.38□□□□□ -1.71
CLDN18P56856 AC007497.1-201ENST00000610421 561 ntBASIC4.38□□□□□ -1.71
CLDN18P56856 AL022401.1-201ENST00000619498 108 ntBASIC4.38□□□□□ -1.71
CLDN18P56856 AC015908.5-201ENST00000623289 343 ntBASIC4.38□□□□□ -1.71
CLDN18P56856 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.38□□□□□ -1.71
CLDN18P56856 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.38□□□□□ -1.71
CLDN18P56856 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.38□□□□□ -1.71
CLDN18P56856 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.38□□□□□ -1.71
CLDN18P56856 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
CLDN18P56856 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CLDN18P56856 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.38□□□□□ -1.71
CLDN18P56856 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CLDN18P56856 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.38□□□□□ -1.71
CLDN18P56856 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLDN18P56856 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.38□□□□□ -1.71
CLDN18P56856 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLDN18P56856 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
CLDN18P56856 AC073136.1-201ENST00000449426 2884 ntBASIC4.38□□□□□ -1.71
CLDN18P56856 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLDN18P56856 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.38□□□□□ -1.71
CLDN18P56856 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLDN18P56856 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN18P56856 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN18P56856 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN18P56856 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN18P56856 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.37□□□□□ -1.71
CLDN18P56856 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN18P56856 AL034370.1-201ENST00000397254 1590 ntBASIC4.37□□□□□ -1.71
CLDN18P56856 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.37□□□□□ -1.71
CLDN18P56856 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN18P56856 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CLDN18P56856 RNVU1-6-201ENST00000364688 164 ntBASIC4.37□□□□□ -1.71
CLDN18P56856 AC114755.2-201ENST00000413520 361 ntBASIC4.37□□□□□ -1.71
CLDN18P56856 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.37□□□□□ -1.71
CLDN18P56856 AC013429.2-201ENST00000418798 781 ntBASIC4.37□□□□□ -1.71
CLDN18P56856 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.37□□□□□ -1.71
CLDN18P56856 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.37□□□□□ -1.71
CLDN18P56856 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.37□□□□□ -1.71
CLDN18P56856 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms