Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 MIR600-201ENST00000385007 98 ntBASIC5.2□□□□□ -1.58
LIMK1P53667 OR4K12P-201ENST00000406538 961 ntBASIC5.2□□□□□ -1.58
LIMK1P53667 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.2□□□□□ -1.58
LIMK1P53667 RPL17P36-201ENST00000420302 549 ntBASIC5.2□□□□□ -1.58
LIMK1P53667 AC009480.2-201ENST00000422916 432 ntBASIC5.2□□□□□ -1.58
LIMK1P53667 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.2□□□□□ -1.58
LIMK1P53667 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.2□□□□□ -1.58
LIMK1P53667 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.2□□□□□ -1.58
LIMK1P53667 NANOGP9-201ENST00000439890 892 ntBASIC5.2□□□□□ -1.58
LIMK1P53667 ELOCP10-201ENST00000440624 327 ntBASIC5.2□□□□□ -1.58
LIMK1P53667 AL353898.1-201ENST00000444055 238 ntBASIC5.2□□□□□ -1.58
LIMK1P53667 RPS15AP29-201ENST00000445539 400 ntBASIC5.2□□□□□ -1.58
LIMK1P53667 MTND5P8-201ENST00000449817 1083 ntBASIC5.2□□□□□ -1.58
LIMK1P53667 AL161747.1-201ENST00000480068 358 ntBASIC5.2□□□□□ -1.58
LIMK1P53667 ATP5LP5-201ENST00000483050 299 ntBASIC5.2□□□□□ -1.58
LIMK1P53667 HMGB1P3-201ENST00000502802 616 ntBASIC5.2□□□□□ -1.58
LIMK1P53667 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.2□□□□□ -1.58
LIMK1P53667 SLC25A15P5-201ENST00000508033 253 ntBASIC5.2□□□□□ -1.58
LIMK1P53667 AC021146.7-201ENST00000509604 775 ntBASIC5.2□□□□□ -1.58
LIMK1P53667 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LIMK1P53667 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.2□□□□□ -1.58
LIMK1P53667 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.2□□□□□ -1.58
LIMK1P53667 OR4A17P-201ENST00000526032 904 ntBASIC5.2□□□□□ -1.58
LIMK1P53667 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.2□□□□□ -1.58
LIMK1P53667 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.2□□□□□ -1.58
LIMK1P53667 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.2□□□□□ -1.58
LIMK1P53667 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.2□□□□□ -1.58
LIMK1P53667 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.2□□□□□ -1.58
LIMK1P53667 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.2□□□□□ -1.58
LIMK1P53667 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.2□□□□□ -1.58
LIMK1P53667 AC009237.13-201ENST00000603193 276 ntBASIC5.2□□□□□ -1.58
LIMK1P53667 OR4H6P-202ENST00000603819 340 ntBASIC5.2□□□□□ -1.58
LIMK1P53667 ELOCP34-201ENST00000604436 327 ntBASIC5.2□□□□□ -1.58
LIMK1P53667 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LIMK1P53667 AL356490.1-201ENST00000623079 479 ntBASIC5.2□□□□□ -1.58
LIMK1P53667 AC135068.12-201ENST00000637370 931 ntBASIC5.2□□□□□ -1.58
LIMK1P53667 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.2□□□□□ -1.58
LIMK1P53667 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.2□□□□□ -1.58
LIMK1P53667 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LIMK1P53667 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LIMK1P53667 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LIMK1P53667 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.2□□□□□ -1.58
LIMK1P53667 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LIMK1P53667 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
LIMK1P53667 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
LIMK1P53667 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
LIMK1P53667 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LIMK1P53667 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
LIMK1P53667 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
LIMK1P53667 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LIMK1P53667 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LIMK1P53667 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.19□□□□□ -1.58
LIMK1P53667 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
LIMK1P53667 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LIMK1P53667 AC017002.4-201ENST00000604721 1525 ntBASIC5.19□□□□□ -1.58
LIMK1P53667 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
LIMK1P53667 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.19□□□□□ -1.58
LIMK1P53667 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LIMK1P53667 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LIMK1P53667 SNORA70.6-201ENST00000383934 134 ntBASIC5.19□□□□□ -1.58
LIMK1P53667 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LIMK1P53667 AL356057.1-202ENST00000402263 756 ntBASIC5.19□□□□□ -1.58
LIMK1P53667 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.19□□□□□ -1.58
LIMK1P53667 RNU6-603P-201ENST00000411403 107 ntBASIC5.19□□□□□ -1.58
LIMK1P53667 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.19□□□□□ -1.58
LIMK1P53667 NDUFB4P8-201ENST00000435351 367 ntBASIC5.19□□□□□ -1.58
LIMK1P53667 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.19□□□□□ -1.58
LIMK1P53667 LINC02210-201ENST00000444561 288 ntBASIC5.19□□□□□ -1.58
LIMK1P53667 AC012512.1-201ENST00000446594 718 ntBASIC5.19□□□□□ -1.58
LIMK1P53667 KNOP1P3-201ENST00000446933 426 ntBASIC5.19□□□□□ -1.58
LIMK1P53667 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.19□□□□□ -1.58
LIMK1P53667 PPIAP21-201ENST00000464473 501 ntBASIC5.19□□□□□ -1.58
LIMK1P53667 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
LIMK1P53667 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.19□□□□□ -1.58
LIMK1P53667 RPL23AP72-201ENST00000492447 435 ntBASIC5.19□□□□□ -1.58
LIMK1P53667 AC026979.1-201ENST00000492525 396 ntBASIC5.19□□□□□ -1.58
LIMK1P53667 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.19□□□□□ -1.58
LIMK1P53667 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.19□□□□□ -1.58
LIMK1P53667 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LIMK1P53667 PDCD5P1-201ENST00000543528 309 ntBASIC5.19□□□□□ -1.58
LIMK1P53667 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.19□□□□□ -1.58
LIMK1P53667 AC068714.1-201ENST00000559623 800 ntBASIC5.19□□□□□ -1.58
LIMK1P53667 LINC00557-201ENST00000563184 1279 ntBASIC5.19□□□□□ -1.58
LIMK1P53667 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LIMK1P53667 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.19□□□□□ -1.58
LIMK1P53667 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LIMK1P53667 MIR4691-201ENST00000583764 85 ntBASIC5.19□□□□□ -1.58
LIMK1P53667 AC040174.2-201ENST00000602701 465 ntBASIC5.19□□□□□ -1.58
LIMK1P53667 RPL26P30-202ENST00000602923 645 ntBASIC5.19□□□□□ -1.58
LIMK1P53667 AC020910.2-201ENST00000603635 610 ntBASIC5.19□□□□□ -1.58
LIMK1P53667 AP004372.1-201ENST00000604842 844 ntBASIC5.19□□□□□ -1.58
LIMK1P53667 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.19□□□□□ -1.58
LIMK1P53667 AC068831.8-201ENST00000620171 435 ntBASIC5.19□□□□□ -1.58
LIMK1P53667 AC020923.1-201ENST00000624021 917 ntBASIC5.19□□□□□ -1.58
LIMK1P53667 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.19□□□□□ -1.58
LIMK1P53667 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
LIMK1P53667 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.19□□□□□ -1.58
LIMK1P53667 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
LIMK1P53667 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LIMK1P53667 IRF5P1-201ENST00000504852 2164 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms