Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
RNF144AP50876 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RNF144AP50876 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.8□□□□□ -1.32
RNF144AP50876 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.79□□□□□ -1.32
RNF144AP50876 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
RNF144AP50876 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
RNF144AP50876 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RNF144AP50876 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RNF144AP50876 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RNF144AP50876 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
RNF144AP50876 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RNF144AP50876 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
RNF144AP50876 SNORA73B-201ENST00000363217 204 ntBASIC6.79□□□□□ -1.32
RNF144AP50876 RN7SKP211-201ENST00000363328 315 ntBASIC6.79□□□□□ -1.32
RNF144AP50876 RN7SKP44-201ENST00000363602 316 ntBASIC6.79□□□□□ -1.32
RNF144AP50876 Y_RNA.197-201ENST00000364004 102 ntBASIC6.79□□□□□ -1.32
RNF144AP50876 Y_RNA.476-201ENST00000384347 108 ntBASIC6.79□□□□□ -1.32
RNF144AP50876 AL136116.1-201ENST00000403591 381 ntBASIC6.79□□□□□ -1.32
RNF144AP50876 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC6.79□□□□□ -1.32
RNF144AP50876 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC6.79□□□□□ -1.32
RNF144AP50876 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC6.79□□□□□ -1.32
RNF144AP50876 RPL34P3-201ENST00000421454 338 ntBASIC6.79□□□□□ -1.32
RNF144AP50876 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC6.79□□□□□ -1.32
RNF144AP50876 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC6.79□□□□□ -1.32
RNF144AP50876 AC092809.1-201ENST00000441469 474 ntBASIC6.79□□□□□ -1.32
RNF144AP50876 RPS27AP15-201ENST00000447672 466 ntBASIC6.79□□□□□ -1.32
RNF144AP50876 HIST1H2APS6-201ENST00000448609 364 ntBASIC6.79□□□□□ -1.32
RNF144AP50876 IGKV1OR2-2-201ENST00000451163 355 ntBASIC6.79□□□□□ -1.32
RNF144AP50876 BTF3P15-201ENST00000455606 336 ntBASIC6.79□□□□□ -1.32
RNF144AP50876 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC6.79□□□□□ -1.32
RNF144AP50876 AC021205.1-201ENST00000468797 348 ntBASIC6.79□□□□□ -1.32
RNF144AP50876 RN7SL314P-201ENST00000490735 292 ntBASIC6.79□□□□□ -1.32
RNF144AP50876 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC6.79□□□□□ -1.32
RNF144AP50876 AC104136.1-201ENST00000512969 394 ntBASIC6.79□□□□□ -1.32
RNF144AP50876 ST13P6-201ENST00000522430 1102 ntBASIC6.79□□□□□ -1.32
RNF144AP50876 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.79□□□□□ -1.32
RNF144AP50876 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.79□□□□□ -1.32
RNF144AP50876 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC6.79□□□□□ -1.32
RNF144AP50876 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC6.79□□□□□ -1.32
RNF144AP50876 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
RNF144AP50876 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC6.79□□□□□ -1.32
RNF144AP50876 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC6.79□□□□□ -1.32
RNF144AP50876 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.79□□□□□ -1.32
RNF144AP50876 EIF1-207ENST00000591776 797 ntTSL 4 BASIC6.79□□□□□ -1.32
RNF144AP50876 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC6.79□□□□□ -1.32
RNF144AP50876 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC6.79□□□□□ -1.32
RNF144AP50876 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC6.79□□□□□ -1.32
RNF144AP50876 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC6.79□□□□□ -1.32
RNF144AP50876 AC009318.4-201ENST00000620496 486 ntBASIC6.79□□□□□ -1.32
RNF144AP50876 MIR6807-201ENST00000621968 92 ntBASIC6.79□□□□□ -1.32
RNF144AP50876 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.79□□□□□ -1.32
RNF144AP50876 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
RNF144AP50876 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC6.79□□□□□ -1.32
RNF144AP50876 OFD1P5Y-201ENST00000447585 2590 ntBASIC6.79□□□□□ -1.32
RNF144AP50876 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RNF144AP50876 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
RNF144AP50876 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC6.79□□□□□ -1.32
RNF144AP50876 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RNF144AP50876 NBPF8-201ENST00000583271 5330 ntBASIC6.79□□□□□ -1.32
RNF144AP50876 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
RNF144AP50876 AC012618.3-205ENST00000637896 1496 ntBASIC6.79□□□□□ -1.32
RNF144AP50876 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RNF144AP50876 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
RNF144AP50876 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RNF144AP50876 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RNF144AP50876 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF144AP50876 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF144AP50876 AL161901.1-201ENST00000624954 3425 ntBASIC6.78□□□□□ -1.32
RNF144AP50876 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
RNF144AP50876 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF144AP50876 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF144AP50876 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RNF144AP50876 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
RNF144AP50876 Y_RNA.28-201ENST00000362554 111 ntBASIC6.78□□□□□ -1.32
RNF144AP50876 RNY4P36-201ENST00000391116 96 ntBASIC6.78□□□□□ -1.32
RNF144AP50876 CHEK2P3-201ENST00000416118 248 ntBASIC6.78□□□□□ -1.32
RNF144AP50876 AC114482.1-201ENST00000418010 247 ntBASIC6.78□□□□□ -1.32
RNF144AP50876 AC127537.1-201ENST00000418183 748 ntBASIC6.78□□□□□ -1.32
RNF144AP50876 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC6.78□□□□□ -1.32
RNF144AP50876 AL593856.1-201ENST00000419949 805 ntBASIC6.78□□□□□ -1.32
RNF144AP50876 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC6.78□□□□□ -1.32
RNF144AP50876 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC6.78□□□□□ -1.32
RNF144AP50876 PPIL1P1-201ENST00000423936 499 ntBASIC6.78□□□□□ -1.32
RNF144AP50876 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC6.78□□□□□ -1.32
RNF144AP50876 AL731892.1-201ENST00000437364 1192 ntBASIC6.78□□□□□ -1.32
RNF144AP50876 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC6.78□□□□□ -1.32
RNF144AP50876 AL139135.2-201ENST00000445040 433 ntBASIC6.78□□□□□ -1.32
RNF144AP50876 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RNF144AP50876 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RNF144AP50876 AC013429.1-201ENST00000456604 422 ntBASIC6.78□□□□□ -1.32
RNF144AP50876 AC079193.1-201ENST00000460497 588 ntBASIC6.78□□□□□ -1.32
RNF144AP50876 AC007547.1-201ENST00000462177 490 ntBASIC6.78□□□□□ -1.32
RNF144AP50876 AC078785.3-201ENST00000476607 425 ntBASIC6.78□□□□□ -1.32
RNF144AP50876 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.78□□□□□ -1.32
RNF144AP50876 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC6.78□□□□□ -1.32
RNF144AP50876 RNU6-1271P-201ENST00000517049 105 ntBASIC6.78□□□□□ -1.32
RNF144AP50876 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.78□□□□□ -1.32
RNF144AP50876 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC6.78□□□□□ -1.32
RNF144AP50876 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC6.78□□□□□ -1.32
RNF144AP50876 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms