Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.68□□□□□ -1.66
SHMT2P34897 SBDSP1-204ENST00000453858 737 ntBASIC4.68□□□□□ -1.66
SHMT2P34897 RN7SL558P-201ENST00000497468 299 ntBASIC4.68□□□□□ -1.66
SHMT2P34897 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.68□□□□□ -1.66
SHMT2P34897 RNU6-709P-201ENST00000517257 104 ntBASIC4.68□□□□□ -1.66
SHMT2P34897 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.68□□□□□ -1.66
SHMT2P34897 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.68□□□□□ -1.66
SHMT2P34897 AC091042.1-201ENST00000579213 173 ntBASIC4.68□□□□□ -1.66
SHMT2P34897 AC022726.1-201ENST00000587475 207 ntBASIC4.68□□□□□ -1.66
SHMT2P34897 BNIP3P32-201ENST00000600015 554 ntBASIC4.68□□□□□ -1.66
SHMT2P34897 SNORD91B-202ENST00000608459 222 ntBASIC4.68□□□□□ -1.66
SHMT2P34897 AC116651.1-201ENST00000609724 556 ntBASIC4.68□□□□□ -1.66
SHMT2P34897 FAM27B-201ENST00000610601 213 ntBASIC4.68□□□□□ -1.66
SHMT2P34897 AC100827.5-201ENST00000615883 426 ntBASIC4.68□□□□□ -1.66
SHMT2P34897 AL022401.1-201ENST00000619498 108 ntBASIC4.68□□□□□ -1.66
SHMT2P34897 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.68□□□□□ -1.66
SHMT2P34897 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SHMT2P34897 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SHMT2P34897 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.68□□□□□ -1.66
SHMT2P34897 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SHMT2P34897 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.67□□□□□ -1.66
SHMT2P34897 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.67□□□□□ -1.66
SHMT2P34897 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SHMT2P34897 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SHMT2P34897 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
SHMT2P34897 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.67□□□□□ -1.66
SHMT2P34897 AC073429.2-201ENST00000569694 1444 ntBASIC4.67□□□□□ -1.66
SHMT2P34897 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHMT2P34897 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHMT2P34897 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SHMT2P34897 SNORD96B-201ENST00000386148 79 ntBASIC4.67□□□□□ -1.66
SHMT2P34897 VDAC2P1-201ENST00000399358 958 ntBASIC4.67□□□□□ -1.66
SHMT2P34897 RN7SKP100-201ENST00000411258 284 ntBASIC4.67□□□□□ -1.66
SHMT2P34897 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.67□□□□□ -1.66
SHMT2P34897 NRBF2P3-201ENST00000432731 865 ntBASIC4.67□□□□□ -1.66
SHMT2P34897 RAB9AP5-201ENST00000437794 597 ntBASIC4.67□□□□□ -1.66
SHMT2P34897 NPM1P33-201ENST00000438918 872 ntBASIC4.67□□□□□ -1.66
SHMT2P34897 RAB9AP2-201ENST00000443911 597 ntBASIC4.67□□□□□ -1.66
SHMT2P34897 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.67□□□□□ -1.66
SHMT2P34897 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.67□□□□□ -1.66
SHMT2P34897 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.67□□□□□ -1.66
SHMT2P34897 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.67□□□□□ -1.66
SHMT2P34897 AC104971.1-201ENST00000495117 578 ntBASIC4.67□□□□□ -1.66
SHMT2P34897 AC105233.1-201ENST00000498840 781 ntBASIC4.67□□□□□ -1.66
SHMT2P34897 ARL4AP1-201ENST00000503220 705 ntBASIC4.67□□□□□ -1.66
SHMT2P34897 RFPL4AP3-201ENST00000515267 345 ntBASIC4.67□□□□□ -1.66
SHMT2P34897 RNU1-6P-201ENST00000516290 144 ntBASIC4.67□□□□□ -1.66
SHMT2P34897 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.67□□□□□ -1.66
SHMT2P34897 IGKV1-32-201ENST00000519290 311 ntBASIC4.67□□□□□ -1.66
SHMT2P34897 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.67□□□□□ -1.66
SHMT2P34897 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.67□□□□□ -1.66
SHMT2P34897 AC025857.1-201ENST00000525252 377 ntBASIC4.67□□□□□ -1.66
SHMT2P34897 AP001880.2-201ENST00000538233 448 ntBASIC4.67□□□□□ -1.66
SHMT2P34897 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.67□□□□□ -1.66
SHMT2P34897 AC133555.2-201ENST00000550213 292 ntBASIC4.67□□□□□ -1.66
SHMT2P34897 RN7SL802P-201ENST00000577858 299 ntBASIC4.67□□□□□ -1.66
SHMT2P34897 AC011453.2-201ENST00000603737 729 ntBASIC4.67□□□□□ -1.66
SHMT2P34897 AC004948.1-201ENST00000609858 672 ntBASIC4.67□□□□□ -1.66
SHMT2P34897 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.67□□□□□ -1.66
SHMT2P34897 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SHMT2P34897 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.67□□□□□ -1.66
SHMT2P34897 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SHMT2P34897 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHMT2P34897 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.67□□□□□ -1.66
SHMT2P34897 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SHMT2P34897 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SHMT2P34897 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SHMT2P34897 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.67□□□□□ -1.66
SHMT2P34897 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHMT2P34897 AC053481.2-202ENST00000582394 1500 ntBASIC4.67□□□□□ -1.66
SHMT2P34897 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.66□□□□□ -1.66
SHMT2P34897 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.66□□□□□ -1.66
SHMT2P34897 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.66□□□□□ -1.66
SHMT2P34897 TLK1P1-201ENST00000456760 2440 ntBASIC4.66□□□□□ -1.66
SHMT2P34897 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SHMT2P34897 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.66□□□□□ -1.66
SHMT2P34897 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SHMT2P34897 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.66□□□□□ -1.66
SHMT2P34897 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.66□□□□□ -1.66
SHMT2P34897 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.66□□□□□ -1.66
SHMT2P34897 RNA5SP191-201ENST00000362585 102 ntBASIC4.66□□□□□ -1.66
SHMT2P34897 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.66□□□□□ -1.66
SHMT2P34897 BX510359.2-201ENST00000417920 305 ntBASIC4.66□□□□□ -1.66
SHMT2P34897 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.66□□□□□ -1.66
SHMT2P34897 FABP7P1-201ENST00000424004 391 ntBASIC4.66□□□□□ -1.66
SHMT2P34897 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.66□□□□□ -1.66
SHMT2P34897 USP9YP9-201ENST00000429406 715 ntBASIC4.66□□□□□ -1.66
SHMT2P34897 AL049745.1-201ENST00000433953 286 ntBASIC4.66□□□□□ -1.66
SHMT2P34897 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.66□□□□□ -1.66
SHMT2P34897 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.66□□□□□ -1.66
SHMT2P34897 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.66□□□□□ -1.66
SHMT2P34897 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.66□□□□□ -1.66
SHMT2P34897 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.66□□□□□ -1.66
SHMT2P34897 RPL7AP10-201ENST00000481016 791 ntBASIC4.66□□□□□ -1.66
SHMT2P34897 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.66□□□□□ -1.66
SHMT2P34897 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.66□□□□□ -1.66
SHMT2P34897 CCNHP1-201ENST00000513311 678 ntBASIC4.66□□□□□ -1.66
SHMT2P34897 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.66□□□□□ -1.66
SHMT2P34897 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.66□□□□□ -1.66
SHMT2P34897 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms