Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CD40P25942 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CD40P25942 PABPC1P9-201ENST00000426076 1612 ntBASIC5.45□□□□□ -1.54
CD40P25942 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CD40P25942 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CD40P25942 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CD40P25942 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC5.45□□□□□ -1.54
CD40P25942 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
CD40P25942 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CD40P25942 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CD40P25942 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CD40P25942 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CD40P25942 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.45□□□□□ -1.54
CD40P25942 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CD40P25942 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CD40P25942 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CD40P25942 LPAL2-203ENST00000454031 2498 ntBASIC5.45□□□□□ -1.54
CD40P25942 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CD40P25942 RNU6-216P-201ENST00000363282 104 ntBASIC5.45□□□□□ -1.54
CD40P25942 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
CD40P25942 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.45□□□□□ -1.54
CD40P25942 RNU6-1215P-201ENST00000384441 102 ntBASIC5.45□□□□□ -1.54
CD40P25942 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CD40P25942 AL450338.1-201ENST00000407987 512 ntBASIC5.45□□□□□ -1.54
CD40P25942 U3.43-201ENST00000410734 213 ntBASIC5.45□□□□□ -1.54
CD40P25942 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC5.45□□□□□ -1.54
CD40P25942 OFD1P11Y-201ENST00000418213 1177 ntBASIC5.45□□□□□ -1.54
CD40P25942 AC092647.1-201ENST00000420654 287 ntBASIC5.45□□□□□ -1.54
CD40P25942 AC009237.2-201ENST00000421358 284 ntBASIC5.45□□□□□ -1.54
CD40P25942 AC092641.1-201ENST00000440229 772 ntBASIC5.45□□□□□ -1.54
CD40P25942 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.45□□□□□ -1.54
CD40P25942 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.45□□□□□ -1.54
CD40P25942 AL590004.3-202ENST00000445883 451 ntBASIC5.45□□□□□ -1.54
CD40P25942 COX6CP12-201ENST00000446748 202 ntBASIC5.45□□□□□ -1.54
CD40P25942 ST13P20-201ENST00000447996 1065 ntBASIC5.45□□□□□ -1.54
CD40P25942 SLC31A1P1-201ENST00000451221 567 ntBASIC5.45□□□□□ -1.54
CD40P25942 AC009963.3-201ENST00000458090 486 ntBASIC5.45□□□□□ -1.54
CD40P25942 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.45□□□□□ -1.54
CD40P25942 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC5.45□□□□□ -1.54
CD40P25942 RNU6-1218P-201ENST00000458990 108 ntBASIC5.45□□□□□ -1.54
CD40P25942 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.45□□□□□ -1.54
CD40P25942 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.45□□□□□ -1.54
CD40P25942 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.45□□□□□ -1.54
CD40P25942 MTCYBP17-201ENST00000503579 789 ntBASIC5.45□□□□□ -1.54
CD40P25942 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC5.45□□□□□ -1.54
CD40P25942 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.45□□□□□ -1.54
CD40P25942 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.45□□□□□ -1.54
CD40P25942 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.45□□□□□ -1.54
CD40P25942 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.45□□□□□ -1.54
CD40P25942 AC239860.2-201ENST00000525886 270 ntBASIC5.45□□□□□ -1.54
CD40P25942 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC5.45□□□□□ -1.54
CD40P25942 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.45□□□□□ -1.54
CD40P25942 AC090888.3-201ENST00000558917 509 ntBASIC5.45□□□□□ -1.54
CD40P25942 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.45□□□□□ -1.54
CD40P25942 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.45□□□□□ -1.54
CD40P25942 MRPS21P8-201ENST00000569196 235 ntBASIC5.45□□□□□ -1.54
CD40P25942 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.45□□□□□ -1.54
CD40P25942 GLYATL1P2-202ENST00000588046 902 ntBASIC5.45□□□□□ -1.54
CD40P25942 AL136363.2-201ENST00000604173 851 ntBASIC5.45□□□□□ -1.54
CD40P25942 AC069304.2-201ENST00000605154 435 ntBASIC5.45□□□□□ -1.54
CD40P25942 AC116651.1-201ENST00000609724 556 ntBASIC5.45□□□□□ -1.54
CD40P25942 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.45□□□□□ -1.54
CD40P25942 AC074140.1-201ENST00000621617 208 ntBASIC5.45□□□□□ -1.54
CD40P25942 AC025048.6-202ENST00000627667 438 ntBASIC5.45□□□□□ -1.54
CD40P25942 OR2L1P-202ENST00000641567 1023 ntBASIC5.45□□□□□ -1.54
CD40P25942 MAPK10-365ENST00000641902 3825 ntBASIC5.45□□□□□ -1.54
CD40P25942 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CD40P25942 AC005225.5-201ENST00000623547 2225 ntBASIC5.45□□□□□ -1.54
CD40P25942 AP000866.6-201ENST00000638898 3579 ntBASIC5.45□□□□□ -1.54
CD40P25942 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.45□□□□□ -1.54
CD40P25942 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC5.45□□□□□ -1.54
CD40P25942 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CD40P25942 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CD40P25942 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CD40P25942 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CD40P25942 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.45□□□□□ -1.54
CD40P25942 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CD40P25942 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CD40P25942 AC027575.3-201ENST00000583058 2747 ntBASIC5.45□□□□□ -1.54
CD40P25942 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC5.45□□□□□ -1.54
CD40P25942 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.45□□□□□ -1.54
CD40P25942 AC092162.3-201ENST00000624511 1624 ntBASIC5.45□□□□□ -1.54
CD40P25942 CUBNP3-201ENST00000457461 1784 ntBASIC5.44□□□□□ -1.54
CD40P25942 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CD40P25942 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CD40P25942 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
CD40P25942 TNPO1P2-201ENST00000426249 2665 ntBASIC5.44□□□□□ -1.54
CD40P25942 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CD40P25942 BIN2P1-201ENST00000504996 1530 ntBASIC5.44□□□□□ -1.54
CD40P25942 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CD40P25942 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CD40P25942 AC134882.1-201ENST00000603738 1676 ntBASIC5.44□□□□□ -1.54
CD40P25942 AL442128.2-201ENST00000620246 1824 ntBASIC5.44□□□□□ -1.54
CD40P25942 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CD40P25942 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CD40P25942 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
CD40P25942 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.44□□□□□ -1.54
CD40P25942 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CD40P25942 CAST-202ENST00000325674 3356 ntTSL 5 BASIC5.44□□□□□ -1.54
CD40P25942 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms