Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AL022322.2-201ENST00000624072 20397 ntBASIC5.22□□□□□ -1.57
PDGFRAP16234 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
PDGFRAP16234 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.22□□□□□ -1.57
PDGFRAP16234 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.22□□□□□ -1.57
PDGFRAP16234 AC107027.3-201ENST00000565095 3473 ntBASIC5.22□□□□□ -1.57
PDGFRAP16234 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
PDGFRAP16234 AC017002.4-201ENST00000604721 1525 ntBASIC5.22□□□□□ -1.57
PDGFRAP16234 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
PDGFRAP16234 DDX6P1-205ENST00000441966 1436 ntBASIC5.22□□□□□ -1.57
PDGFRAP16234 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.22□□□□□ -1.57
PDGFRAP16234 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.22□□□□□ -1.57
PDGFRAP16234 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.57
PDGFRAP16234 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
PDGFRAP16234 ECM1P2-201ENST00000503354 1577 ntBASIC5.21□□□□□ -1.57
PDGFRAP16234 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.21□□□□□ -1.57
PDGFRAP16234 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.21□□□□□ -1.58
PDGFRAP16234 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
PDGFRAP16234 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PDGFRAP16234 SNORA73.1-201ENST00000363107 205 ntBASIC5.21□□□□□ -1.58
PDGFRAP16234 RNA5SP123-201ENST00000363244 119 ntBASIC5.21□□□□□ -1.58
PDGFRAP16234 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PDGFRAP16234 CCNB2P1-201ENST00000399411 1150 ntBASIC5.21□□□□□ -1.58
PDGFRAP16234 Z97832.1-201ENST00000402490 328 ntBASIC5.21□□□□□ -1.58
PDGFRAP16234 RN7SKP125-201ENST00000410481 302 ntBASIC5.21□□□□□ -1.58
PDGFRAP16234 RN7SKP247-201ENST00000411094 308 ntBASIC5.21□□□□□ -1.58
PDGFRAP16234 RPL26P37-201ENST00000411983 438 ntBASIC5.21□□□□□ -1.58
PDGFRAP16234 AC016769.2-201ENST00000414815 475 ntBASIC5.21□□□□□ -1.58
PDGFRAP16234 AL590762.4-201ENST00000425885 253 ntBASIC5.21□□□□□ -1.58
PDGFRAP16234 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.21□□□□□ -1.58
PDGFRAP16234 MTND4LP14-201ENST00000429447 288 ntBASIC5.21□□□□□ -1.58
PDGFRAP16234 RPS27P18-201ENST00000431701 247 ntBASIC5.21□□□□□ -1.58
PDGFRAP16234 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.21□□□□□ -1.58
PDGFRAP16234 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.21□□□□□ -1.58
PDGFRAP16234 SCAND3P1-201ENST00000439854 1060 ntBASIC5.21□□□□□ -1.58
PDGFRAP16234 AC073052.1-201ENST00000440417 714 ntBASIC5.21□□□□□ -1.58
PDGFRAP16234 AL500527.1-201ENST00000448532 255 ntBASIC5.21□□□□□ -1.58
PDGFRAP16234 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.21□□□□□ -1.58
PDGFRAP16234 AL356981.1-201ENST00000454879 684 ntBASIC5.21□□□□□ -1.58
PDGFRAP16234 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.21□□□□□ -1.58
PDGFRAP16234 RN7SL809P-201ENST00000482040 297 ntBASIC5.21□□□□□ -1.58
PDGFRAP16234 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.21□□□□□ -1.58
PDGFRAP16234 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PDGFRAP16234 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.21□□□□□ -1.58
PDGFRAP16234 HAUS1P1-201ENST00000505275 832 ntBASIC5.21□□□□□ -1.58
PDGFRAP16234 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.21□□□□□ -1.58
PDGFRAP16234 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.21□□□□□ -1.58
PDGFRAP16234 NDUFB5P1-201ENST00000508134 564 ntBASIC5.21□□□□□ -1.58
PDGFRAP16234 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.21□□□□□ -1.58
PDGFRAP16234 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.21□□□□□ -1.58
PDGFRAP16234 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PDGFRAP16234 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
PDGFRAP16234 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.21□□□□□ -1.58
PDGFRAP16234 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.21□□□□□ -1.58
PDGFRAP16234 OR1F2P-201ENST00000570470 933 ntBASIC5.21□□□□□ -1.58
PDGFRAP16234 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.21□□□□□ -1.58
PDGFRAP16234 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.21□□□□□ -1.58
PDGFRAP16234 AC005377.1-201ENST00000605126 456 ntBASIC5.21□□□□□ -1.58
PDGFRAP16234 AC024940.4-201ENST00000605507 246 ntBASIC5.21□□□□□ -1.58
PDGFRAP16234 AL049794.2-201ENST00000616301 365 ntBASIC5.21□□□□□ -1.58
PDGFRAP16234 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PDGFRAP16234 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.21□□□□□ -1.58
PDGFRAP16234 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PDGFRAP16234 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
PDGFRAP16234 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
PDGFRAP16234 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.21□□□□□ -1.58
PDGFRAP16234 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.21□□□□□ -1.58
PDGFRAP16234 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PDGFRAP16234 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.2□□□□□ -1.58
PDGFRAP16234 AL450326.2-201ENST00000421913 1962 ntBASIC5.2□□□□□ -1.58
PDGFRAP16234 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.2□□□□□ -1.58
PDGFRAP16234 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.2□□□□□ -1.58
PDGFRAP16234 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDGFRAP16234 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PDGFRAP16234 RN7SKP104-201ENST00000362605 328 ntBASIC5.2□□□□□ -1.58
PDGFRAP16234 RNA5SP428-201ENST00000365129 132 ntBASIC5.2□□□□□ -1.58
PDGFRAP16234 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.2□□□□□ -1.58
PDGFRAP16234 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDGFRAP16234 AL109941.1-201ENST00000401925 229 ntBASIC5.2□□□□□ -1.58
PDGFRAP16234 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.2□□□□□ -1.58
PDGFRAP16234 AF186996.5-201ENST00000418098 904 ntBASIC5.2□□□□□ -1.58
PDGFRAP16234 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.2□□□□□ -1.58
PDGFRAP16234 ZFAND6P1-201ENST00000434138 605 ntBASIC5.2□□□□□ -1.58
PDGFRAP16234 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.2□□□□□ -1.58
PDGFRAP16234 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.2□□□□□ -1.58
PDGFRAP16234 AP000936.3-201ENST00000438127 255 ntBASIC5.2□□□□□ -1.58
PDGFRAP16234 AL137845.2-201ENST00000444292 988 ntBASIC5.2□□□□□ -1.58
PDGFRAP16234 RPS15AP29-201ENST00000445539 400 ntBASIC5.2□□□□□ -1.58
PDGFRAP16234 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.2□□□□□ -1.58
PDGFRAP16234 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.2□□□□□ -1.58
PDGFRAP16234 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.2□□□□□ -1.58
PDGFRAP16234 RN7SL319P-201ENST00000480656 221 ntBASIC5.2□□□□□ -1.58
PDGFRAP16234 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PDGFRAP16234 HMGB1P3-201ENST00000502802 616 ntBASIC5.2□□□□□ -1.58
PDGFRAP16234 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.2□□□□□ -1.58
PDGFRAP16234 RPL23AP53-201ENST00000521854 457 ntBASIC5.2□□□□□ -1.58
PDGFRAP16234 AP000676.2-201ENST00000529711 301 ntBASIC5.2□□□□□ -1.58
PDGFRAP16234 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
PDGFRAP16234 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.2□□□□□ -1.58
PDGFRAP16234 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.2□□□□□ -1.58
PDGFRAP16234 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms