Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 RPL23AP16-201ENST00000441715 421 ntBASIC6.57□□□□□ -1.36
PDGFAP04085 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
PDGFAP04085 MTND1P3-201ENST00000484956 952 ntBASIC6.57□□□□□ -1.36
PDGFAP04085 UBA52P3-201ENST00000491303 382 ntBASIC6.57□□□□□ -1.36
PDGFAP04085 RNU2-46P-201ENST00000517038 113 ntBASIC6.57□□□□□ -1.36
PDGFAP04085 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.57□□□□□ -1.36
PDGFAP04085 CENPUP1-201ENST00000526649 1202 ntBASIC6.57□□□□□ -1.36
PDGFAP04085 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.57□□□□□ -1.36
PDGFAP04085 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.57□□□□□ -1.36
PDGFAP04085 HSPE1P2-201ENST00000554777 306 ntBASIC6.57□□□□□ -1.36
PDGFAP04085 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC6.57□□□□□ -1.36
PDGFAP04085 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.57□□□□□ -1.36
PDGFAP04085 AL157394.1-201ENST00000562983 1224 ntBASIC6.57□□□□□ -1.36
PDGFAP04085 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.57□□□□□ -1.36
PDGFAP04085 MIR3157-201ENST00000578688 85 ntBASIC6.57□□□□□ -1.36
PDGFAP04085 AC017100.2-201ENST00000584628 355 ntBASIC6.57□□□□□ -1.36
PDGFAP04085 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.57□□□□□ -1.36
PDGFAP04085 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.57□□□□□ -1.36
PDGFAP04085 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC6.57□□□□□ -1.36
PDGFAP04085 AC011500.1-201ENST00000601963 469 ntBASIC6.57□□□□□ -1.36
PDGFAP04085 RPS4XP21-201ENST00000603814 750 ntBASIC6.57□□□□□ -1.36
PDGFAP04085 AC011816.2-201ENST00000607089 556 ntBASIC6.57□□□□□ -1.36
PDGFAP04085 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.57□□□□□ -1.36
PDGFAP04085 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC6.57□□□□□ -1.36
PDGFAP04085 RN7SL126P-201ENST00000616400 299 ntBASIC6.57□□□□□ -1.36
PDGFAP04085 AC025162.2-201ENST00000619602 560 ntBASIC6.57□□□□□ -1.36
PDGFAP04085 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC6.57□□□□□ -1.36
PDGFAP04085 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC6.57□□□□□ -1.36
PDGFAP04085 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.57□□□□□ -1.36
PDGFAP04085 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.57□□□□□ -1.36
PDGFAP04085 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.57□□□□□ -1.36
PDGFAP04085 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC6.57□□□□□ -1.36
PDGFAP04085 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
PDGFAP04085 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
PDGFAP04085 PABPC1P8-201ENST00000452851 2086 ntBASIC6.57□□□□□ -1.36
PDGFAP04085 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PDGFAP04085 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PDGFAP04085 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PDGFAP04085 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
PDGFAP04085 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.57□□□□□ -1.36
PDGFAP04085 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PDGFAP04085 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PDGFAP04085 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.57□□□□□ -1.36
PDGFAP04085 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC6.57□□□□□ -1.36
PDGFAP04085 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PDGFAP04085 RLIMP2-201ENST00000427891 1563 ntBASIC6.57□□□□□ -1.36
PDGFAP04085 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
PDGFAP04085 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PDGFAP04085 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
PDGFAP04085 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PDGFAP04085 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
PDGFAP04085 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PDGFAP04085 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.56□□□□□ -1.36
PDGFAP04085 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
PDGFAP04085 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
PDGFAP04085 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PDGFAP04085 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PDGFAP04085 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
PDGFAP04085 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
PDGFAP04085 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC6.56□□□□□ -1.36
PDGFAP04085 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PDGFAP04085 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
PDGFAP04085 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.56□□□□□ -1.36
PDGFAP04085 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PDGFAP04085 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PDGFAP04085 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
PDGFAP04085 GNG5P1-201ENST00000255500 204 ntBASIC6.56□□□□□ -1.36
PDGFAP04085 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PDGFAP04085 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PDGFAP04085 SNORD56.2-201ENST00000363242 71 ntBASIC6.56□□□□□ -1.36
PDGFAP04085 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.56□□□□□ -1.36
PDGFAP04085 RPL31P1-201ENST00000398116 372 ntBASIC6.56□□□□□ -1.36
PDGFAP04085 AL356057.2-201ENST00000403318 432 ntBASIC6.56□□□□□ -1.36
PDGFAP04085 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC6.56□□□□□ -1.36
PDGFAP04085 HMGB3P20-201ENST00000417997 600 ntBASIC6.56□□□□□ -1.36
PDGFAP04085 AC007394.1-201ENST00000421941 531 ntBASIC6.56□□□□□ -1.36
PDGFAP04085 SPATA20P1-201ENST00000423089 438 ntBASIC6.56□□□□□ -1.36
PDGFAP04085 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC6.56□□□□□ -1.36
PDGFAP04085 Z83313.1-201ENST00000433780 718 ntBASIC6.56□□□□□ -1.36
PDGFAP04085 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.56□□□□□ -1.36
PDGFAP04085 AC073909.1-201ENST00000447112 999 ntBASIC6.56□□□□□ -1.36
PDGFAP04085 RPL37P3-201ENST00000456825 293 ntBASIC6.56□□□□□ -1.36
PDGFAP04085 RPSAP7-201ENST00000456871 885 ntBASIC6.56□□□□□ -1.36
PDGFAP04085 BTF3P5-201ENST00000457252 467 ntBASIC6.56□□□□□ -1.36
PDGFAP04085 RPS15AP1-201ENST00000457423 391 ntBASIC6.56□□□□□ -1.36
PDGFAP04085 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC6.56□□□□□ -1.36
PDGFAP04085 AC096922.1-201ENST00000461635 651 ntBASIC6.56□□□□□ -1.36
PDGFAP04085 RN7SL83P-201ENST00000468131 297 ntBASIC6.56□□□□□ -1.36
PDGFAP04085 RPL29P23-201ENST00000486188 442 ntBASIC6.56□□□□□ -1.36
PDGFAP04085 AC022296.2-201ENST00000512424 202 ntBASIC6.56□□□□□ -1.36
PDGFAP04085 MINOS1P4-201ENST00000515470 318 ntBASIC6.56□□□□□ -1.36
PDGFAP04085 RNU6-488P-201ENST00000515918 99 ntBASIC6.56□□□□□ -1.36
PDGFAP04085 RN7SKP11-201ENST00000517018 287 ntBASIC6.56□□□□□ -1.36
PDGFAP04085 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC6.56□□□□□ -1.36
PDGFAP04085 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.56□□□□□ -1.36
PDGFAP04085 IGHVIII-26-1-201ENST00000520387 250 ntBASIC6.56□□□□□ -1.36
PDGFAP04085 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC6.56□□□□□ -1.36
PDGFAP04085 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC6.56□□□□□ -1.36
PDGFAP04085 PMS2P3-207ENST00000529061 717 ntBASIC6.56□□□□□ -1.36
PDGFAP04085 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms