Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 ARL4AP1-201ENST00000503220 705 ntBASIC4.98□□□□□ -1.61
APOEP02649 RN7SKP276-201ENST00000516242 268 ntBASIC4.98□□□□□ -1.61
APOEP02649 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.98□□□□□ -1.61
APOEP02649 SOX5P1-201ENST00000524155 1127 ntBASIC4.98□□□□□ -1.61
APOEP02649 AC008147.3-201ENST00000548666 354 ntBASIC4.98□□□□□ -1.61
APOEP02649 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.98□□□□□ -1.61
APOEP02649 AC124856.1-201ENST00000600819 896 ntBASIC4.98□□□□□ -1.61
APOEP02649 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.98□□□□□ -1.61
APOEP02649 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.98□□□□□ -1.61
APOEP02649 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
APOEP02649 OR14L1P-202ENST00000641545 3009 ntBASIC4.98□□□□□ -1.61
APOEP02649 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
APOEP02649 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
APOEP02649 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
APOEP02649 AC007382.1-201ENST00000624376 2618 ntBASIC4.97□□□□□ -1.61
APOEP02649 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
APOEP02649 AC103591.2-201ENST00000265259 766 ntBASIC4.97□□□□□ -1.61
APOEP02649 RN7SKP199-201ENST00000410325 305 ntBASIC4.97□□□□□ -1.61
APOEP02649 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.97□□□□□ -1.61
APOEP02649 RGS17P1-201ENST00000423358 553 ntBASIC4.97□□□□□ -1.61
APOEP02649 USP9YP9-201ENST00000429406 715 ntBASIC4.97□□□□□ -1.61
APOEP02649 NMNAT1P2-201ENST00000435192 860 ntBASIC4.97□□□□□ -1.61
APOEP02649 MRPL48P1-201ENST00000445390 636 ntBASIC4.97□□□□□ -1.61
APOEP02649 AC006967.1-201ENST00000467608 589 ntBASIC4.97□□□□□ -1.61
APOEP02649 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.97□□□□□ -1.61
APOEP02649 RPS23P1-201ENST00000491662 432 ntBASIC4.97□□□□□ -1.61
APOEP02649 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.97□□□□□ -1.61
APOEP02649 AC113430.1-201ENST00000506872 718 ntBASIC4.97□□□□□ -1.61
APOEP02649 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.97□□□□□ -1.61
APOEP02649 OR7H2P-201ENST00000513483 306 ntBASIC4.97□□□□□ -1.61
APOEP02649 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.97□□□□□ -1.61
APOEP02649 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.97□□□□□ -1.61
APOEP02649 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.97□□□□□ -1.61
APOEP02649 MIR5699-201ENST00000578903 90 ntBASIC4.97□□□□□ -1.61
APOEP02649 MIR4270-201ENST00000581799 70 ntBASIC4.97□□□□□ -1.61
APOEP02649 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.97□□□□□ -1.61
APOEP02649 RNF138P2-201ENST00000603490 592 ntBASIC4.97□□□□□ -1.61
APOEP02649 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.97□□□□□ -1.61
APOEP02649 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.97□□□□□ -1.61
APOEP02649 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.97□□□□□ -1.61
APOEP02649 AC006453.5-201ENST00000636451 619 ntBASIC4.97□□□□□ -1.61
APOEP02649 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.97□□□□□ -1.61
APOEP02649 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
APOEP02649 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
APOEP02649 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
APOEP02649 AL136164.3-201ENST00000624429 3978 ntBASIC4.97□□□□□ -1.61
APOEP02649 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.97□□□□□ -1.61
APOEP02649 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
APOEP02649 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.97□□□□□ -1.61
APOEP02649 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
APOEP02649 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
APOEP02649 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.96□□□□□ -1.61
APOEP02649 AL442639.1-201ENST00000625030 1899 ntBASIC4.96□□□□□ -1.61
APOEP02649 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
APOEP02649 AP001273.1-201ENST00000624493 3152 ntBASIC4.96□□□□□ -1.61
APOEP02649 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
APOEP02649 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
APOEP02649 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
APOEP02649 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
APOEP02649 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
APOEP02649 AL592291.1-201ENST00000403830 352 ntBASIC4.96□□□□□ -1.62
APOEP02649 HMGB3P9-201ENST00000441799 583 ntBASIC4.96□□□□□ -1.62
APOEP02649 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.96□□□□□ -1.62
APOEP02649 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
APOEP02649 SCARNA22-201ENST00000503991 125 ntBASIC4.96□□□□□ -1.62
APOEP02649 AC091868.1-201ENST00000508746 304 ntBASIC4.96□□□□□ -1.62
APOEP02649 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.96□□□□□ -1.62
APOEP02649 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.96□□□□□ -1.62
APOEP02649 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.96□□□□□ -1.62
APOEP02649 RNA5SP464-201ENST00000516251 108 ntBASIC4.96□□□□□ -1.62
APOEP02649 AF186190.1-201ENST00000517470 480 ntBASIC4.96□□□□□ -1.62
APOEP02649 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.96□□□□□ -1.62
APOEP02649 IGKV1-32-201ENST00000519290 311 ntBASIC4.96□□□□□ -1.62
APOEP02649 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.96□□□□□ -1.62
APOEP02649 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.96□□□□□ -1.62
APOEP02649 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.96□□□□□ -1.62
APOEP02649 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.96□□□□□ -1.62
APOEP02649 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.96□□□□□ -1.62
APOEP02649 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.96□□□□□ -1.62
APOEP02649 OR7A19P-201ENST00000608051 733 ntBASIC4.96□□□□□ -1.62
APOEP02649 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.96□□□□□ -1.62
APOEP02649 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.96□□□□□ -1.62
APOEP02649 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.96□□□□□ -1.62
APOEP02649 OR8G7P-201ENST00000616658 848 ntBASIC4.96□□□□□ -1.62
APOEP02649 LINC00901.1-201ENST00000617252 152 ntBASIC4.96□□□□□ -1.62
APOEP02649 AC073342.3-201ENST00000624211 193 ntBASIC4.96□□□□□ -1.62
APOEP02649 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
APOEP02649 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
APOEP02649 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
APOEP02649 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
APOEP02649 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
APOEP02649 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.95□□□□□ -1.62
APOEP02649 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
APOEP02649 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
APOEP02649 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.95□□□□□ -1.62
APOEP02649 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
APOEP02649 RNU1-82P-201ENST00000390851 165 ntBASIC4.95□□□□□ -1.62
APOEP02649 MIR298-201ENST00000401212 88 ntBASIC4.95□□□□□ -1.62
APOEP02649 U3.35-201ENST00000408405 208 ntBASIC4.95□□□□□ -1.62
APOEP02649 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms