Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NKX2-2O95096 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NKX2-2O95096 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
NKX2-2O95096 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NKX2-2O95096 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
NKX2-2O95096 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NKX2-2O95096 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NKX2-2O95096 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NKX2-2O95096 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NKX2-2O95096 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
NKX2-2O95096 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
NKX2-2O95096 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
NKX2-2O95096 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NKX2-2O95096 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NKX2-2O95096 ENSAP3-201ENST00000312710 333 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 U3.3-201ENST00000362986 216 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 RNU5B-1-201ENST00000363286 116 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 RNA5SP435-201ENST00000364044 108 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NKX2-2O95096 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.86□□□□□ -1.63
NKX2-2O95096 SNORA67-201ENST00000384423 137 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 OR8V1P-201ENST00000395193 873 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 RN7SKP59-201ENST00000410520 314 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 RN7SKP206-201ENST00000410823 293 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 RPL12P9-201ENST00000412942 488 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 COX5BP7-201ENST00000414780 274 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 MTND4P11-201ENST00000417020 1058 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 RPL7L1P9-201ENST00000431298 745 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 RPS24P8-201ENST00000431490 402 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NKX2-2O95096 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.86□□□□□ -1.63
NKX2-2O95096 SEPT14P24-201ENST00000447236 180 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 BX842559.2-201ENST00000451418 605 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 AC011225.1-201ENST00000457751 369 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 snoU109.3-201ENST00000459477 145 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NKX2-2O95096 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NKX2-2O95096 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.86□□□□□ -1.63
NKX2-2O95096 AC010627.1-201ENST00000503819 1294 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 RPS4XP20-201ENST00000505751 772 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.86□□□□□ -1.63
NKX2-2O95096 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.86□□□□□ -1.63
NKX2-2O95096 IGKV2-18-201ENST00000522607 343 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.86□□□□□ -1.63
NKX2-2O95096 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.86□□□□□ -1.63
NKX2-2O95096 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 CYB5AP5-201ENST00000549779 389 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.86□□□□□ -1.63
NKX2-2O95096 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.86□□□□□ -1.63
NKX2-2O95096 POLR2KP1-201ENST00000553226 168 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 PRPF19P1-201ENST00000584766 898 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.86□□□□□ -1.63
NKX2-2O95096 FKBP1AP1-201ENST00000594588 318 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 AC125494.3-201ENST00000602759 455 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 AC069307.1-201ENST00000602820 447 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.86□□□□□ -1.63
NKX2-2O95096 AC093673.2-201ENST00000609674 331 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 AC118658.2-201ENST00000618697 459 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 AC090527.3-201ENST00000619041 548 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.86□□□□□ -1.63
NKX2-2O95096 AC022079.2-201ENST00000619739 566 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 AL669942.2-201ENST00000620352 697 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 AC138907.10-201ENST00000623708 983 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 CYP4F35P-202ENST00000636121 390 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 CASC19-264ENST00000641912 1184 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
NKX2-2O95096 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.86□□□□□ -1.63
NKX2-2O95096 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
NKX2-2O95096 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.86□□□□□ -1.63
NKX2-2O95096 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
NKX2-2O95096 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NKX2-2O95096 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NKX2-2O95096 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NKX2-2O95096 AC002525.1-201ENST00000624392 1622 ntBASIC4.86□□□□□ -1.63
NKX2-2O95096 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
NKX2-2O95096 AP001284.1-201ENST00000528393 2118 ntBASIC4.85□□□□□ -1.63
NKX2-2O95096 AC027228.2-201ENST00000567141 2154 ntBASIC4.85□□□□□ -1.63
NKX2-2O95096 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
NKX2-2O95096 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.85□□□□□ -1.63
NKX2-2O95096 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.85□□□□□ -1.63
NKX2-2O95096 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NKX2-2O95096 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
NKX2-2O95096 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NKX2-2O95096 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NKX2-2O95096 RN7SKP162-201ENST00000363605 345 ntBASIC4.85□□□□□ -1.63
NKX2-2O95096 U3.7-201ENST00000363668 216 ntBASIC4.85□□□□□ -1.63
NKX2-2O95096 RNA5SP90-201ENST00000364801 99 ntBASIC4.85□□□□□ -1.63
NKX2-2O95096 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NKX2-2O95096 U6.112-201ENST00000384129 70 ntBASIC4.85□□□□□ -1.63
NKX2-2O95096 RNU6-298P-201ENST00000390888 96 ntBASIC4.85□□□□□ -1.63
NKX2-2O95096 SNORD65C-201ENST00000390962 71 ntBASIC4.85□□□□□ -1.63
NKX2-2O95096 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.85□□□□□ -1.63
NKX2-2O95096 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.85□□□□□ -1.63
NKX2-2O95096 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NKX2-2O95096 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.85□□□□□ -1.63
NKX2-2O95096 AC108075.1-201ENST00000424692 529 ntBASIC4.85□□□□□ -1.63
NKX2-2O95096 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.85□□□□□ -1.63
NKX2-2O95096 CFL1P1-202ENST00000432948 411 ntBASIC4.85□□□□□ -1.63
NKX2-2O95096 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms