Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.56□□□□□ -1.52
VPS4BO75351 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS4BO75351 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS4BO75351 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS4BO75351 AC109446.2-201ENST00000567872 497 ntBASIC5.56□□□□□ -1.52
VPS4BO75351 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
VPS4BO75351 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS4BO75351 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.56□□□□□ -1.52
VPS4BO75351 AC010503.3-201ENST00000594355 540 ntBASIC5.56□□□□□ -1.52
VPS4BO75351 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.56□□□□□ -1.52
VPS4BO75351 MTND3P19-201ENST00000603825 345 ntBASIC5.56□□□□□ -1.52
VPS4BO75351 FO393422.1-201ENST00000603908 708 ntBASIC5.56□□□□□ -1.52
VPS4BO75351 FAM27E4-201ENST00000605259 342 ntBASIC5.56□□□□□ -1.52
VPS4BO75351 AC009237.15-201ENST00000610252 501 ntBASIC5.56□□□□□ -1.52
VPS4BO75351 AC079395.2-201ENST00000610982 737 ntBASIC5.56□□□□□ -1.52
VPS4BO75351 AC037198.3-201ENST00000616754 526 ntBASIC5.56□□□□□ -1.52
VPS4BO75351 AL136228.1-201ENST00000622221 319 ntBASIC5.56□□□□□ -1.52
VPS4BO75351 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS4BO75351 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
VPS4BO75351 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.56□□□□□ -1.52
VPS4BO75351 AC011933.2-201ENST00000578539 2790 ntBASIC5.56□□□□□ -1.52
VPS4BO75351 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VPS4BO75351 AP005432.1-201ENST00000580891 3485 ntBASIC5.56□□□□□ -1.52
VPS4BO75351 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VPS4BO75351 OR13C1P-202ENST00000641378 2919 ntBASIC5.56□□□□□ -1.52
VPS4BO75351 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VPS4BO75351 AC007938.2-201ENST00000604666 2634 ntBASIC5.56□□□□□ -1.52
VPS4BO75351 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS4BO75351 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VPS4BO75351 MFSD8-219ENST00000641228 2559 ntBASIC5.56□□□□□ -1.52
VPS4BO75351 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS4BO75351 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS4BO75351 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
VPS4BO75351 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS4BO75351 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS4BO75351 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VPS4BO75351 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VPS4BO75351 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
VPS4BO75351 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.55□□□□□ -1.52
VPS4BO75351 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS4BO75351 RNA5SP132-201ENST00000364725 118 ntBASIC5.55□□□□□ -1.52
VPS4BO75351 SNORA5.1-201ENST00000384275 131 ntBASIC5.55□□□□□ -1.52
VPS4BO75351 MIR142-201ENST00000384835 87 ntBASIC5.55□□□□□ -1.52
VPS4BO75351 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS4BO75351 BTF3P8-201ENST00000414577 526 ntBASIC5.55□□□□□ -1.52
VPS4BO75351 MTND2P18-201ENST00000419962 1030 ntBASIC5.55□□□□□ -1.52
VPS4BO75351 PTP4A1P1-201ENST00000420539 515 ntBASIC5.55□□□□□ -1.52
VPS4BO75351 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.55□□□□□ -1.52
VPS4BO75351 TMEM183AP1-205ENST00000432739 290 ntBASIC5.55□□□□□ -1.52
VPS4BO75351 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS4BO75351 GAPDHP58-201ENST00000438477 1006 ntBASIC5.55□□□□□ -1.52
VPS4BO75351 AL359265.1-201ENST00000440296 795 ntBASIC5.55□□□□□ -1.52
VPS4BO75351 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS4BO75351 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS4BO75351 AL035407.2-201ENST00000454090 378 ntBASIC5.55□□□□□ -1.52
VPS4BO75351 GEMIN2P1-201ENST00000454246 752 ntBASIC5.55□□□□□ -1.52
VPS4BO75351 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS4BO75351 RN7SL799P-201ENST00000475891 298 ntBASIC5.55□□□□□ -1.52
VPS4BO75351 SIAH1P1-201ENST00000479411 923 ntBASIC5.55□□□□□ -1.52
VPS4BO75351 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS4BO75351 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.55□□□□□ -1.52
VPS4BO75351 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.55□□□□□ -1.52
VPS4BO75351 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS4BO75351 AC138866.2-201ENST00000508650 584 ntBASIC5.55□□□□□ -1.52
VPS4BO75351 AC008565.1-201ENST00000509046 885 ntBASIC5.55□□□□□ -1.52
VPS4BO75351 AC021193.1-201ENST00000511607 420 ntBASIC5.55□□□□□ -1.52
VPS4BO75351 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS4BO75351 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
VPS4BO75351 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS4BO75351 AL442163.2-201ENST00000553912 710 ntBASIC5.55□□□□□ -1.52
VPS4BO75351 AC023813.2-201ENST00000564321 469 ntBASIC5.55□□□□□ -1.52
VPS4BO75351 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
VPS4BO75351 MIR4776-2-201ENST00000580204 80 ntBASIC5.55□□□□□ -1.52
VPS4BO75351 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.55□□□□□ -1.52
VPS4BO75351 AC015688.2-201ENST00000584523 262 ntBASIC5.55□□□□□ -1.52
VPS4BO75351 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.55□□□□□ -1.52
VPS4BO75351 AL353778.1-201ENST00000603149 408 ntBASIC5.55□□□□□ -1.52
VPS4BO75351 AC104695.2-201ENST00000605056 775 ntBASIC5.55□□□□□ -1.52
VPS4BO75351 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.55□□□□□ -1.52
VPS4BO75351 AL139124.1-201ENST00000609123 421 ntBASIC5.55□□□□□ -1.52
VPS4BO75351 AL390318.1-201ENST00000624564 687 ntBASIC5.55□□□□□ -1.52
VPS4BO75351 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.55□□□□□ -1.52
VPS4BO75351 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS4BO75351 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
VPS4BO75351 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VPS4BO75351 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS4BO75351 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VPS4BO75351 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
VPS4BO75351 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
VPS4BO75351 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
VPS4BO75351 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.55□□□□□ -1.52
VPS4BO75351 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VPS4BO75351 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VPS4BO75351 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VPS4BO75351 PARP4P2-201ENST00000446672 3326 ntBASIC5.54□□□□□ -1.52
VPS4BO75351 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VPS4BO75351 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VPS4BO75351 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
VPS4BO75351 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
VPS4BO75351 AL121886.1-201ENST00000358609 435 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms