Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 RNU6-319P-201ENST00000516025 108 ntBASIC5.23□□□□□ -1.57
O00370 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.23□□□□□ -1.57
O00370 AC008033.2-201ENST00000542626 177 ntBASIC5.23□□□□□ -1.57
O00370 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
O00370 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.23□□□□□ -1.57
O00370 AC005520.3-201ENST00000602874 370 ntBASIC5.23□□□□□ -1.57
O00370 AC096553.1-201ENST00000605169 829 ntBASIC5.23□□□□□ -1.57
O00370 AC133644.2-201ENST00000608142 540 ntBASIC5.23□□□□□ -1.57
O00370 SNORD91B-202ENST00000608459 222 ntBASIC5.23□□□□□ -1.57
O00370 AC104307.1-201ENST00000616142 196 ntBASIC5.23□□□□□ -1.57
O00370 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.23□□□□□ -1.57
O00370 SOCS5P3-201ENST00000425115 1576 ntBASIC5.23□□□□□ -1.57
O00370 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.23□□□□□ -1.57
O00370 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
O00370 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
O00370 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
O00370 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
O00370 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
O00370 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.22□□□□□ -1.57
O00370 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
O00370 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
O00370 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.22□□□□□ -1.57
O00370 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.22□□□□□ -1.57
O00370 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
O00370 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
O00370 AL589647.1-201ENST00000402485 466 ntBASIC5.22□□□□□ -1.57
O00370 RNA5SP296-201ENST00000410523 111 ntBASIC5.22□□□□□ -1.57
O00370 GTF2IP5-201ENST00000414608 731 ntBASIC5.22□□□□□ -1.57
O00370 OR13Z1P-201ENST00000416141 834 ntBASIC5.22□□□□□ -1.57
O00370 OR2AM1P-201ENST00000422137 422 ntBASIC5.22□□□□□ -1.57
O00370 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.22□□□□□ -1.57
O00370 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.22□□□□□ -1.57
O00370 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.22□□□□□ -1.57
O00370 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.22□□□□□ -1.57
O00370 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
O00370 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.22□□□□□ -1.57
O00370 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.22□□□□□ -1.57
O00370 MORF4L1P4-201ENST00000450245 976 ntBASIC5.22□□□□□ -1.57
O00370 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.22□□□□□ -1.57
O00370 AC093166.2-201ENST00000455969 1017 ntBASIC5.22□□□□□ -1.57
O00370 snoU13.20-201ENST00000459180 104 ntBASIC5.22□□□□□ -1.57
O00370 RN7SL517P-201ENST00000462240 305 ntBASIC5.22□□□□□ -1.57
O00370 AC090686.1-201ENST00000481577 749 ntBASIC5.22□□□□□ -1.57
O00370 AC093270.2-201ENST00000486157 792 ntBASIC5.22□□□□□ -1.57
O00370 ARL4AP1-201ENST00000503220 705 ntBASIC5.22□□□□□ -1.57
O00370 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.22□□□□□ -1.57
O00370 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.22□□□□□ -1.57
O00370 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.22□□□□□ -1.57
O00370 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
O00370 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.22□□□□□ -1.57
O00370 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.22□□□□□ -1.57
O00370 GCSHP4-201ENST00000538792 439 ntBASIC5.22□□□□□ -1.57
O00370 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.22□□□□□ -1.57
O00370 AC084759.1-201ENST00000561168 290 ntBASIC5.22□□□□□ -1.57
O00370 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.22□□□□□ -1.57
O00370 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.22□□□□□ -1.57
O00370 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.22□□□□□ -1.57
O00370 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.22□□□□□ -1.57
O00370 RNF138P2-201ENST00000603490 592 ntBASIC5.22□□□□□ -1.57
O00370 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.22□□□□□ -1.57
O00370 AL353662.3-201ENST00000625131 237 ntBASIC5.22□□□□□ -1.57
O00370 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.22□□□□□ -1.57
O00370 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
O00370 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
O00370 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
O00370 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
O00370 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
O00370 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
O00370 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
O00370 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
O00370 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
O00370 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.22□□□□□ -1.57
O00370 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.21□□□□□ -1.57
O00370 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.21□□□□□ -1.57
O00370 AC021242.1-201ENST00000507315 2035 ntBASIC5.21□□□□□ -1.57
O00370 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.21□□□□□ -1.57
O00370 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
O00370 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
O00370 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
O00370 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
O00370 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
O00370 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
O00370 VDAC2P1-201ENST00000399358 958 ntBASIC5.21□□□□□ -1.58
O00370 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.21□□□□□ -1.58
O00370 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.21□□□□□ -1.58
O00370 TBCAP2-201ENST00000416175 326 ntBASIC5.21□□□□□ -1.58
O00370 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
O00370 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.21□□□□□ -1.58
O00370 NDUFA5P1-201ENST00000433858 341 ntBASIC5.21□□□□□ -1.58
O00370 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.21□□□□□ -1.58
O00370 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.21□□□□□ -1.58
O00370 RPL23AP56-201ENST00000460778 453 ntBASIC5.21□□□□□ -1.58
O00370 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.21□□□□□ -1.58
O00370 AC116562.1-201ENST00000485355 781 ntBASIC5.21□□□□□ -1.58
O00370 ACTR6P1-201ENST00000514311 1104 ntBASIC5.21□□□□□ -1.58
O00370 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.21□□□□□ -1.58
O00370 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
O00370 SULT1C2P2-201ENST00000562517 294 ntBASIC5.21□□□□□ -1.58
O00370 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.21□□□□□ -1.58
O00370 AC011453.2-201ENST00000603737 729 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms