Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AL807761.1-201ENST00000417622 171 ntBASIC3.81□□□□□ -1.8
TCRBV4S1A1TA0A5B7 NRBF2P3-201ENST00000432731 865 ntBASIC3.81□□□□□ -1.8
TCRBV4S1A1TA0A5B7 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC3.81□□□□□ -1.8
TCRBV4S1A1TA0A5B7 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC3.81□□□□□ -1.8
TCRBV4S1A1TA0A5B7 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TCRBV4S1A1TA0A5B7 AC073264.2-201ENST00000448886 166 ntBASIC3.81□□□□□ -1.8
TCRBV4S1A1TA0A5B7 AURKAPS2-201ENST00000454983 333 ntBASIC3.81□□□□□ -1.8
TCRBV4S1A1TA0A5B7 RPS29P33-201ENST00000456717 146 ntBASIC3.81□□□□□ -1.8
TCRBV4S1A1TA0A5B7 RPL23AP72-201ENST00000492447 435 ntBASIC3.81□□□□□ -1.8
TCRBV4S1A1TA0A5B7 RN7SL558P-201ENST00000497468 299 ntBASIC3.81□□□□□ -1.8
TCRBV4S1A1TA0A5B7 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC3.81□□□□□ -1.8
TCRBV4S1A1TA0A5B7 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC3.81□□□□□ -1.8
TCRBV4S1A1TA0A5B7 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC3.81□□□□□ -1.8
TCRBV4S1A1TA0A5B7 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC3.81□□□□□ -1.8
TCRBV4S1A1TA0A5B7 RNU6-709P-201ENST00000517257 104 ntBASIC3.81□□□□□ -1.8
TCRBV4S1A1TA0A5B7 AP006289.1-201ENST00000538089 277 ntBASIC3.81□□□□□ -1.8
TCRBV4S1A1TA0A5B7 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC3.81□□□□□ -1.8
TCRBV4S1A1TA0A5B7 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC3.81□□□□□ -1.8
TCRBV4S1A1TA0A5B7 AC079075.1-201ENST00000559543 878 ntBASIC3.81□□□□□ -1.8
TCRBV4S1A1TA0A5B7 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC3.81□□□□□ -1.8
TCRBV4S1A1TA0A5B7 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC3.81□□□□□ -1.8
TCRBV4S1A1TA0A5B7 AC233280.2-201ENST00000603917 1070 ntBASIC3.81□□□□□ -1.8
TCRBV4S1A1TA0A5B7 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC3.81□□□□□ -1.8
TCRBV4S1A1TA0A5B7 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
TCRBV4S1A1TA0A5B7 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
TCRBV4S1A1TA0A5B7 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TCRBV4S1A1TA0A5B7 AC092435.4-201ENST00000623012 4159 ntBASIC3.81□□□□□ -1.8
TCRBV4S1A1TA0A5B7 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TCRBV4S1A1TA0A5B7 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TCRBV4S1A1TA0A5B7 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
TCRBV4S1A1TA0A5B7 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TCRBV4S1A1TA0A5B7 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 MAPK10-286ENST00000641208 8747 ntBASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 MTND5P12-201ENST00000502851 1449 ntBASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 RNU6-398P-201ENST00000384143 109 ntBASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 TBCAP2-201ENST00000416175 326 ntBASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 VN1R37P-201ENST00000419096 748 ntBASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 DNAJC19P7-201ENST00000428811 344 ntBASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 AL451139.1-201ENST00000434718 346 ntBASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 ATP5A1P7-201ENST00000453978 1279 ntBASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 RPL23AP56-201ENST00000460778 453 ntBASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 RPL21P6-201ENST00000479171 504 ntBASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 AC011005.3-201ENST00000491624 395 ntBASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 IGHVIII-2-1-201ENST00000518843 291 ntBASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 IGKV1-32-201ENST00000519290 311 ntBASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 RAB9BP1-201ENST00000519581 626 ntBASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 SOX5P1-201ENST00000524155 1127 ntBASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 OR5AN2P-201ENST00000534535 896 ntBASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 AC133555.2-201ENST00000550213 292 ntBASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 AL133406.3-201ENST00000606817 541 ntBASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 AL451049.1-201ENST00000608672 497 ntBASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 FAM27B-201ENST00000610601 213 ntBASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 uc_338.18-201ENST00000615451 175 ntBASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 AC015804.1-201ENST00000622935 435 ntBASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 CR381572.2-201ENST00000624852 397 ntBASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 AL445487.1-201ENST00000415694 1580 ntBASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TCRBV4S1A1TA0A5B7 NCLP2-201ENST00000416078 1462 ntBASIC3.79□□□□□ -1.8
TCRBV4S1A1TA0A5B7 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TCRBV4S1A1TA0A5B7 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
TCRBV4S1A1TA0A5B7 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
TCRBV4S1A1TA0A5B7 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TCRBV4S1A1TA0A5B7 ARHGAP42P3-201ENST00000443989 2508 ntBASIC3.79□□□□□ -1.8
TCRBV4S1A1TA0A5B7 AC116158.1-201ENST00000560231 2129 ntBASIC3.79□□□□□ -1.8
TCRBV4S1A1TA0A5B7 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TCRBV4S1A1TA0A5B7 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TCRBV4S1A1TA0A5B7 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms