Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 OR56A4-201ENST00000330728 1209 ntBASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 RNU6-770P-201ENST00000363929 105 ntBASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 Y_RNA.288-201ENST00000364854 92 ntBASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 RNA5SP240-201ENST00000365355 128 ntBASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 SSX3-202ENST00000376893 800 ntTSL 2 BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 VDAC1P10-201ENST00000416715 891 ntBASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 RPS26P13-201ENST00000419030 330 ntBASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 AC233702.1-201ENST00000482905 502 ntBASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 AC073522.1-201ENST00000483312 377 ntBASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 AC025271.1-201ENST00000485045 429 ntBASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 AC083904.1-201ENST00000487828 231 ntBASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 RPL21P42-201ENST00000488408 464 ntBASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 AC083923.1-201ENST00000523708 376 ntBASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 AP001189.2-201ENST00000527320 189 ntBASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 MIR5690-201ENST00000583739 73 ntBASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 AL031777.2-201ENST00000611953 196 ntBASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 RN7SL126P-201ENST00000616400 299 ntBASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
TRIM35Q9UPQ4 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 Y_RNA.80-201ENST00000362996 102 ntBASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 RNU6-1188P-201ENST00000363795 107 ntBASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 Y_RNA.350-201ENST00000365409 98 ntBASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 PPIAP17-201ENST00000438507 471 ntBASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 RPS26P30-201ENST00000443431 335 ntBASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 AC023512.1-201ENST00000444513 499 ntBASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 AC007383.1-201ENST00000445875 636 ntBASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 AC013470.1-201ENST00000453438 462 ntBASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 SRP68P2-201ENST00000456184 254 ntBASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 RN7SL518P-201ENST00000491887 280 ntBASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 AC106872.2-201ENST00000494303 480 ntBASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 RNA5SP96-201ENST00000516041 107 ntBASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 SCARNA18.2-201ENST00000516882 84 ntBASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 RN7SKP11-201ENST00000517018 287 ntBASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 MRPS16P1-201ENST00000523462 412 ntBASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 AC023157.2-201ENST00000540596 141 ntBASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 AC097468.3-201ENST00000607956 456 ntBASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 ASB8-218ENST00000629941 278 ntTSL 5 BASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC9.28□□□□□ -0.92
TRIM35Q9UPQ4 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
TRIM35Q9UPQ4 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.92
TRIM35Q9UPQ4 APP-206ENST00000359726 3294 ntTSL 2 BASIC9.27□□□□□ -0.92
TRIM35Q9UPQ4 AP002800.1-201ENST00000624982 2225 ntBASIC9.27□□□□□ -0.93
TRIM35Q9UPQ4 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
TRIM35Q9UPQ4 IL5RA-203ENST00000383846 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
TRIM35Q9UPQ4 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
TRIM35Q9UPQ4 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC9.27□□□□□ -0.93
TRIM35Q9UPQ4 AL360271.1-201ENST00000395679 510 ntBASIC9.27□□□□□ -0.93
TRIM35Q9UPQ4 UQCRHP1-204ENST00000424609 274 ntBASIC9.27□□□□□ -0.93
TRIM35Q9UPQ4 FABP7P2-201ENST00000429946 379 ntBASIC9.27□□□□□ -0.93
TRIM35Q9UPQ4 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
TRIM35Q9UPQ4 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC9.27□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms