Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.53□□□□□ -1.52
USP29Q9HBJ7 AC098976.1-201ENST00000513014 541 ntBASIC5.53□□□□□ -1.52
USP29Q9HBJ7 MORF4L1P3-201ENST00000525966 950 ntBASIC5.53□□□□□ -1.52
USP29Q9HBJ7 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.53□□□□□ -1.52
USP29Q9HBJ7 DUXAP5-201ENST00000529668 529 ntBASIC5.53□□□□□ -1.52
USP29Q9HBJ7 AP004607.2-201ENST00000533949 322 ntBASIC5.53□□□□□ -1.52
USP29Q9HBJ7 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.53□□□□□ -1.52
USP29Q9HBJ7 SNORD39.2-201ENST00000579995 76 ntBASIC5.53□□□□□ -1.52
USP29Q9HBJ7 RN7SL356P-201ENST00000582228 248 ntBASIC5.53□□□□□ -1.52
USP29Q9HBJ7 AC004223.2-201ENST00000590309 544 ntBASIC5.53□□□□□ -1.52
USP29Q9HBJ7 SNX6P1-201ENST00000601728 1224 ntBASIC5.53□□□□□ -1.52
USP29Q9HBJ7 AC234772.3-201ENST00000602277 528 ntBASIC5.53□□□□□ -1.52
USP29Q9HBJ7 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.53□□□□□ -1.52
USP29Q9HBJ7 AC092159.4-201ENST00000624944 550 ntBASIC5.53□□□□□ -1.52
USP29Q9HBJ7 C4BPAP1-201ENST00000415474 1893 ntBASIC5.53□□□□□ -1.52
USP29Q9HBJ7 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.53□□□□□ -1.52
USP29Q9HBJ7 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.53□□□□□ -1.52
USP29Q9HBJ7 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP29Q9HBJ7 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.53□□□□□ -1.52
USP29Q9HBJ7 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
USP29Q9HBJ7 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.53□□□□□ -1.52
USP29Q9HBJ7 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
USP29Q9HBJ7 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
USP29Q9HBJ7 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.52□□□□□ -1.53
USP29Q9HBJ7 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.52□□□□□ -1.53
USP29Q9HBJ7 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
USP29Q9HBJ7 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.52□□□□□ -1.53
USP29Q9HBJ7 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
USP29Q9HBJ7 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
USP29Q9HBJ7 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
USP29Q9HBJ7 RNA5SP183-201ENST00000362452 119 ntBASIC5.52□□□□□ -1.53
USP29Q9HBJ7 SNORD56.4-201ENST00000363883 71 ntBASIC5.52□□□□□ -1.53
USP29Q9HBJ7 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
USP29Q9HBJ7 RPL5P19-201ENST00000404228 893 ntBASIC5.52□□□□□ -1.53
USP29Q9HBJ7 OR51B3P-201ENST00000412287 913 ntBASIC5.52□□□□□ -1.53
USP29Q9HBJ7 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.52□□□□□ -1.53
USP29Q9HBJ7 RPS26P13-201ENST00000419030 330 ntBASIC5.52□□□□□ -1.53
USP29Q9HBJ7 MTND2P16-201ENST00000419987 799 ntBASIC5.52□□□□□ -1.53
USP29Q9HBJ7 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.52□□□□□ -1.53
USP29Q9HBJ7 GNG5P5-201ENST00000420444 220 ntBASIC5.52□□□□□ -1.53
USP29Q9HBJ7 AC007394.1-201ENST00000421941 531 ntBASIC5.52□□□□□ -1.53
USP29Q9HBJ7 PNRC2P1-201ENST00000423940 420 ntBASIC5.52□□□□□ -1.53
USP29Q9HBJ7 NANOGP5-201ENST00000424456 877 ntBASIC5.52□□□□□ -1.53
USP29Q9HBJ7 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.52□□□□□ -1.53
USP29Q9HBJ7 DEFB130D-201ENST00000426866 237 ntBASIC5.52□□□□□ -1.53
USP29Q9HBJ7 NANOGP4-201ENST00000427230 913 ntBASIC5.52□□□□□ -1.53
USP29Q9HBJ7 AL035246.1-201ENST00000433554 1255 ntBASIC5.52□□□□□ -1.53
USP29Q9HBJ7 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.52□□□□□ -1.53
USP29Q9HBJ7 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.52□□□□□ -1.53
USP29Q9HBJ7 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.52□□□□□ -1.53
USP29Q9HBJ7 AL672138.1-201ENST00000450604 1015 ntBASIC5.52□□□□□ -1.53
USP29Q9HBJ7 RPL7P45-201ENST00000455851 743 ntBASIC5.52□□□□□ -1.53
USP29Q9HBJ7 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
USP29Q9HBJ7 AC058823.1-201ENST00000485315 474 ntBASIC5.52□□□□□ -1.53
USP29Q9HBJ7 RPS12P31-201ENST00000491419 398 ntBASIC5.52□□□□□ -1.53
USP29Q9HBJ7 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
USP29Q9HBJ7 TPT1P3-201ENST00000492841 512 ntBASIC5.52□□□□□ -1.53
USP29Q9HBJ7 AC090638.1-201ENST00000498296 909 ntBASIC5.52□□□□□ -1.53
USP29Q9HBJ7 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.52□□□□□ -1.53
USP29Q9HBJ7 MTCYBP35-201ENST00000503630 1137 ntBASIC5.52□□□□□ -1.53
USP29Q9HBJ7 OR5M14P-201ENST00000506803 618 ntBASIC5.52□□□□□ -1.53
USP29Q9HBJ7 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.52□□□□□ -1.53
USP29Q9HBJ7 HMGB1P44-201ENST00000508597 572 ntBASIC5.52□□□□□ -1.53
USP29Q9HBJ7 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.52□□□□□ -1.53
USP29Q9HBJ7 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.52□□□□□ -1.53
USP29Q9HBJ7 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC5.52□□□□□ -1.53
USP29Q9HBJ7 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.52□□□□□ -1.53
USP29Q9HBJ7 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.52□□□□□ -1.53
USP29Q9HBJ7 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.52□□□□□ -1.53
USP29Q9HBJ7 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.52□□□□□ -1.53
USP29Q9HBJ7 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.52□□□□□ -1.53
USP29Q9HBJ7 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.52□□□□□ -1.53
USP29Q9HBJ7 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.52□□□□□ -1.53
USP29Q9HBJ7 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.52□□□□□ -1.53
USP29Q9HBJ7 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.52□□□□□ -1.53
USP29Q9HBJ7 AL365400.2-201ENST00000605604 902 ntBASIC5.52□□□□□ -1.53
USP29Q9HBJ7 AC106052.1-201ENST00000608029 497 ntBASIC5.52□□□□□ -1.53
USP29Q9HBJ7 AC097065.2-201ENST00000608159 533 ntBASIC5.52□□□□□ -1.53
USP29Q9HBJ7 AL121612.2-201ENST00000612261 482 ntBASIC5.52□□□□□ -1.53
USP29Q9HBJ7 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.52□□□□□ -1.53
USP29Q9HBJ7 RPL23AP61-201ENST00000623642 466 ntBASIC5.52□□□□□ -1.53
USP29Q9HBJ7 AC083865.1-201ENST00000636634 831 ntBASIC5.52□□□□□ -1.53
USP29Q9HBJ7 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
USP29Q9HBJ7 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.52□□□□□ -1.53
USP29Q9HBJ7 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
USP29Q9HBJ7 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.52□□□□□ -1.53
USP29Q9HBJ7 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
USP29Q9HBJ7 RNU6-171P-201ENST00000384354 107 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms