Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 SAMMSON-226ENST00000642089 1582 ntBASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 AC021242.1-201ENST00000507315 2035 ntBASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 AL606537.1-201ENST00000607258 2011 ntBASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 AC007382.1-201ENST00000624376 2618 ntBASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 TCP1P3-201ENST00000414406 1498 ntBASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 AL133268.1-201ENST00000405676 1401 ntBASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 RN7SKP149-201ENST00000363008 344 ntBASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 AL359643.1-201ENST00000404109 423 ntBASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 MIR1271-201ENST00000408537 86 ntBASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 CASKP1-201ENST00000412870 582 ntBASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 FABP7P2-201ENST00000429946 379 ntBASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 RPL34P6-201ENST00000432390 345 ntBASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 CYCSP11-201ENST00000436426 315 ntBASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 AC010733.1-201ENST00000451515 401 ntBASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 OR7L1P-201ENST00000456181 380 ntBASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 AC112206.1-201ENST00000468416 477 ntBASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 AC073358.1-201ENST00000505671 684 ntBASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 AC091868.1-201ENST00000508746 304 ntBASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 RPS27AP18-201ENST00000515536 459 ntBASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 AL049874.4-201ENST00000557593 255 ntBASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 AC009117.1-201ENST00000563948 554 ntBASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 BGLT3-201ENST00000564523 994 ntBASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 OR7M1P-201ENST00000608946 533 ntBASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 SALL4P2-201ENST00000423288 2910 ntBASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CCSER1Q9C0I3 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 AC107068.1-201ENST00000563286 4218 ntBASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 AC053481.2-202ENST00000582394 1500 ntBASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 RN7SKP74-201ENST00000362849 309 ntBASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 UBBP2-201ENST00000376781 231 ntBASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 RPS3AP53-201ENST00000454716 778 ntBASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 AL356390.1-201ENST00000455684 397 ntBASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 RPL35AP28-201ENST00000459730 331 ntBASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 RPL7AP10-201ENST00000481016 791 ntBASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 MIR3934-201ENST00000579806 107 ntBASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 FAM25E-202ENST00000608562 189 ntBASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 AC011815.3-201ENST00000624194 473 ntBASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCSER1Q9C0I3 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.34□□□□□ -1.56
CCSER1Q9C0I3 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CCSER1Q9C0I3 OR10AB1P-202ENST00000641219 1686 ntBASIC5.34□□□□□ -1.56
CCSER1Q9C0I3 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms