Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.67□□□□□ -1.5
SMOQ99835 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SMOQ99835 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMOQ99835 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.67□□□□□ -1.5
SMOQ99835 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SMOQ99835 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMOQ99835 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SMOQ99835 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
SMOQ99835 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMOQ99835 AC003973.3-201ENST00000624863 2822 ntBASIC5.66□□□□□ -1.5
SMOQ99835 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMOQ99835 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMOQ99835 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
SMOQ99835 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SMOQ99835 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
SMOQ99835 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.66□□□□□ -1.5
SMOQ99835 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMOQ99835 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
SMOQ99835 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SMOQ99835 AC092681.1-201ENST00000297369 291 ntBASIC5.66□□□□□ -1.5
SMOQ99835 OR5H2-201ENST00000355273 945 ntBASIC5.66□□□□□ -1.5
SMOQ99835 AC005294.1-201ENST00000355509 281 ntBASIC5.66□□□□□ -1.5
SMOQ99835 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SMOQ99835 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
SMOQ99835 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMOQ99835 RNU6-224P-201ENST00000384055 107 ntBASIC5.66□□□□□ -1.5
SMOQ99835 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SMOQ99835 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SMOQ99835 RNU1-149P-201ENST00000390870 161 ntBASIC5.66□□□□□ -1.5
SMOQ99835 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.66□□□□□ -1.5
SMOQ99835 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.66□□□□□ -1.5
SMOQ99835 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SMOQ99835 RNA5SP487-201ENST00000410186 122 ntBASIC5.66□□□□□ -1.5
SMOQ99835 AP000534.2-201ENST00000412729 568 ntBASIC5.66□□□□□ -1.5
SMOQ99835 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.66□□□□□ -1.5
SMOQ99835 AL590806.1-201ENST00000415818 853 ntBASIC5.66□□□□□ -1.5
SMOQ99835 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.66□□□□□ -1.5
SMOQ99835 AL133482.1-201ENST00000415988 498 ntBASIC5.66□□□□□ -1.5
SMOQ99835 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.66□□□□□ -1.5
SMOQ99835 AC093084.1-201ENST00000424233 687 ntBASIC5.66□□□□□ -1.5
SMOQ99835 AC108075.1-201ENST00000424692 529 ntBASIC5.66□□□□□ -1.5
SMOQ99835 NANOGP4-201ENST00000427230 913 ntBASIC5.66□□□□□ -1.5
SMOQ99835 AC138761.5-201ENST00000433967 325 ntBASIC5.66□□□□□ -1.5
SMOQ99835 NANOGP2-201ENST00000435391 727 ntBASIC5.66□□□□□ -1.5
SMOQ99835 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.66□□□□□ -1.5
SMOQ99835 MTCYBP12-201ENST00000440559 1134 ntBASIC5.66□□□□□ -1.5
SMOQ99835 OR51B8P-201ENST00000449892 769 ntBASIC5.66□□□□□ -1.5
SMOQ99835 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.66□□□□□ -1.5
SMOQ99835 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SMOQ99835 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.66□□□□□ -1.5
SMOQ99835 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.66□□□□□ -1.5
SMOQ99835 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.66□□□□□ -1.5
SMOQ99835 AC005410.1-202ENST00000460347 485 ntBASIC5.66□□□□□ -1.5
SMOQ99835 PRDX3P4-201ENST00000470828 747 ntBASIC5.66□□□□□ -1.5
SMOQ99835 RPL7P6-201ENST00000480903 738 ntBASIC5.66□□□□□ -1.5
SMOQ99835 AC004815.1-201ENST00000484185 331 ntBASIC5.66□□□□□ -1.5
SMOQ99835 RN7SL214P-201ENST00000487317 265 ntBASIC5.66□□□□□ -1.5
SMOQ99835 AC091951.3-201ENST00000504093 246 ntBASIC5.66□□□□□ -1.5
SMOQ99835 CDH12P2-201ENST00000504393 298 ntBASIC5.66□□□□□ -1.5
SMOQ99835 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.66□□□□□ -1.5
SMOQ99835 AC092593.2-201ENST00000513866 913 ntBASIC5.66□□□□□ -1.5
SMOQ99835 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.66□□□□□ -1.5
SMOQ99835 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.66□□□□□ -1.5
SMOQ99835 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.66□□□□□ -1.5
SMOQ99835 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.66□□□□□ -1.5
SMOQ99835 OR4A43P-201ENST00000532938 908 ntBASIC5.66□□□□□ -1.5
SMOQ99835 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SMOQ99835 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.66□□□□□ -1.5
SMOQ99835 NMNAT1P5-201ENST00000559657 841 ntBASIC5.66□□□□□ -1.5
SMOQ99835 AC023813.2-201ENST00000564321 469 ntBASIC5.66□□□□□ -1.5
SMOQ99835 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SMOQ99835 AC069366.1-201ENST00000583159 838 ntBASIC5.66□□□□□ -1.5
SMOQ99835 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.66□□□□□ -1.5
SMOQ99835 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
SMOQ99835 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SMOQ99835 AC091057.2-201ENST00000602594 792 ntBASIC5.66□□□□□ -1.5
SMOQ99835 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.66□□□□□ -1.5
SMOQ99835 AL049844.2-201ENST00000604280 628 ntBASIC5.66□□□□□ -1.5
SMOQ99835 AC019131.2-201ENST00000609071 870 ntBASIC5.66□□□□□ -1.5
SMOQ99835 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC5.66□□□□□ -1.5
SMOQ99835 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.66□□□□□ -1.5
SMOQ99835 CYP4F35P-202ENST00000636121 390 ntBASIC5.66□□□□□ -1.5
SMOQ99835 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMOQ99835 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.66□□□□□ -1.5
SMOQ99835 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMOQ99835 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.66□□□□□ -1.5
SMOQ99835 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SMOQ99835 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMOQ99835 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SMOQ99835 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SMOQ99835 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.66□□□□□ -1.5
SMOQ99835 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMOQ99835 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
SMOQ99835 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMOQ99835 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SMOQ99835 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.66□□□□□ -1.5
SMOQ99835 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SMOQ99835 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMOQ99835 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SMOQ99835 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 226.4 ms