Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
NECTIN4Q96NY8 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NECTIN4Q96NY8 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NECTIN4Q96NY8 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NECTIN4Q96NY8 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.2□□□□□ -1.58
NECTIN4Q96NY8 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NECTIN4Q96NY8 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.2□□□□□ -1.58
NECTIN4Q96NY8 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 AC027228.2-201ENST00000567141 2154 ntBASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 RNA5SP223-201ENST00000365174 120 ntBASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 AL607077.1-201ENST00000401718 499 ntBASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 SNORA77-201ENST00000408716 125 ntBASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 AC114755.2-201ENST00000413520 361 ntBASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 AC079809.1-201ENST00000415468 276 ntBASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 MTND4LP13-201ENST00000425022 298 ntBASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 HMGN2P27-201ENST00000427352 270 ntBASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 RPS29P9-201ENST00000440360 171 ntBASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 EIF2S2P2-201ENST00000447161 982 ntBASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 AC010503.3-201ENST00000594355 540 ntBASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 AC108738.1-201ENST00000603703 237 ntBASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 AC015922.4-201ENST00000612568 690 ntBASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 MIR6853-201ENST00000619642 74 ntBASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 AC068831.8-201ENST00000620171 435 ntBASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 AC010300.1-201ENST00000600671 5134 ntBASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 MFSD8-220ENST00000641243 1422 ntBASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 AC002525.1-201ENST00000624392 1622 ntBASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
NECTIN4Q96NY8 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 SNORA70F-201ENST00000384142 135 ntBASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 GTF2IP2-201ENST00000424290 697 ntBASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 AC009238.2-201ENST00000431026 355 ntBASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 AC016831.4-201ENST00000438302 307 ntBASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 AC016772.1-201ENST00000444170 1261 ntBASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 RPS5P7-201ENST00000456664 608 ntBASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 HSPE1P22-201ENST00000456856 327 ntBASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 AC089999.1-201ENST00000460336 374 ntBASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 RN7SL814P-201ENST00000487715 300 ntBASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 OR9N1P-201ENST00000491296 333 ntBASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 RPS12P31-201ENST00000491419 398 ntBASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 IGBP1P4-201ENST00000503202 879 ntBASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 AC009268.1-201ENST00000561352 1203 ntBASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 MIR7853-201ENST00000584820 132 ntBASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 FAM60CP-201ENST00000591086 664 ntBASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 AC022387.2-201ENST00000604050 448 ntBASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 Z95327.3-201ENST00000610385 572 ntBASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 AC008833.1-201ENST00000611633 691 ntBASIC5.18□□□□□ -1.58
NECTIN4Q96NY8 AL162574.2-201ENST00000614618 657 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms