Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLDND2Q8NHS1 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLDND2Q8NHS1 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLDND2Q8NHS1 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.08□□□□□ -1.76
CLDND2Q8NHS1 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 A2MP1-204ENST00000566278 4130 ntBASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 SNORA73.1-201ENST00000363107 205 ntBASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 AC114755.2-201ENST00000413520 361 ntBASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 BX510359.2-201ENST00000417920 305 ntBASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 OR2B7P-201ENST00000429302 934 ntBASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 SCAND3P1-201ENST00000439854 1060 ntBASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 RPL36AP15-201ENST00000444514 266 ntBASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 AC096741.1-201ENST00000472250 846 ntBASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 OR11I1P-201ENST00000486033 954 ntBASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 AC021146.3-201ENST00000511911 260 ntBASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 AC108043.1-201ENST00000512696 574 ntBASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 RNA5SP392-201ENST00000516905 112 ntBASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 RAB9BP1-201ENST00000519581 626 ntBASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 SOX5P1-201ENST00000524155 1127 ntBASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 AC005868.1-201ENST00000536421 331 ntBASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 AL049830.4-201ENST00000555149 351 ntBASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 AC011453.2-201ENST00000603737 729 ntBASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 AC008745.1-201ENST00000604064 271 ntBASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 IMMP1LP1-201ENST00000605170 488 ntBASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 AL672167.1-205ENST00000641112 3080 ntBASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CLDND2Q8NHS1 AC107068.1-201ENST00000563286 4218 ntBASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 SOCS5P3-201ENST00000425115 1576 ntBASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 NCLP2-201ENST00000416078 1462 ntBASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 AL357515.1-201ENST00000402967 542 ntBASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 CYCSP10-201ENST00000417973 294 ntBASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 AC069213.2-201ENST00000420238 366 ntBASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 AC000111.2-201ENST00000448200 210 ntBASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 RN7SL354P-201ENST00000469282 294 ntBASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 AC135999.1-201ENST00000478962 479 ntBASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 RPL21P6-201ENST00000479171 504 ntBASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 DEFB109F-201ENST00000491870 277 ntBASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 AC093720.1-201ENST00000505681 714 ntBASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 SNORA26.10-201ENST00000516427 141 ntBASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 AC134698.5-201ENST00000519444 336 ntBASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 OR10D4P-201ENST00000525892 951 ntBASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 CYCSP40-201ENST00000575927 294 ntBASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 RN7SL176P-201ENST00000580352 264 ntBASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 AC098935.2-201ENST00000604222 466 ntBASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 MIR6853-201ENST00000619642 74 ntBASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 MIR7641-1-201ENST00000627518 61 ntBASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 Z95327.2-201ENST00000414579 1873 ntBASIC4.06□□□□□ -1.76
CLDND2Q8NHS1 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms