Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC65Q8IXS2 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC65Q8IXS2 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC65Q8IXS2 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.3□□□□□ -1.56
CCDC65Q8IXS2 RN7SKP5-201ENST00000517045 272 ntBASIC5.3□□□□□ -1.56
CCDC65Q8IXS2 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC65Q8IXS2 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC65Q8IXS2 BGLT3-201ENST00000564523 994 ntBASIC5.3□□□□□ -1.56
CCDC65Q8IXS2 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC65Q8IXS2 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC65Q8IXS2 AC013244.1-201ENST00000604279 193 ntBASIC5.3□□□□□ -1.56
CCDC65Q8IXS2 AC211433.2-201ENST00000608433 387 ntBASIC5.3□□□□□ -1.56
CCDC65Q8IXS2 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC65Q8IXS2 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC65Q8IXS2 LINC00901.1-201ENST00000617252 152 ntBASIC5.3□□□□□ -1.56
CCDC65Q8IXS2 MIR6719-201ENST00000622428 87 ntBASIC5.3□□□□□ -1.56
CCDC65Q8IXS2 AC011815.3-201ENST00000624194 473 ntBASIC5.3□□□□□ -1.56
CCDC65Q8IXS2 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC65Q8IXS2 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC65Q8IXS2 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC65Q8IXS2 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 OR14L1P-202ENST00000641545 3009 ntBASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 MAPK10-320ENST00000641462 6696 ntBASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 AC112255.1-201ENST00000624070 2493 ntBASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 OR52B1P-201ENST00000316506 909 ntBASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 AL645733.1-201ENST00000402250 217 ntBASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 AL592291.1-201ENST00000403830 352 ntBASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 PTMAP3-201ENST00000447474 330 ntBASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 AL356390.1-201ENST00000455684 397 ntBASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 CYCSP34-201ENST00000458172 304 ntBASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 RNU7-157P-201ENST00000459600 66 ntBASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 AC073358.1-201ENST00000505671 684 ntBASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 AC009117.1-201ENST00000563948 554 ntBASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 AC016180.1-201ENST00000567945 403 ntBASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 AC133644.2-201ENST00000608142 540 ntBASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 AC009704.2-201ENST00000618739 483 ntBASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 AC007382.1-201ENST00000624376 2618 ntBASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 AL136164.3-201ENST00000624429 3978 ntBASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 ZFRP1-201ENST00000457579 2970 ntBASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 VN2R3P-201ENST00000422626 1412 ntBASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 AC093535.2-201ENST00000624769 2326 ntBASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC65Q8IXS2 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 AL450326.2-201ENST00000421913 1962 ntBASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 RN7SKP149-201ENST00000363008 344 ntBASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 AL109941.1-201ENST00000401925 229 ntBASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 ARL4AP5-201ENST00000404372 599 ntBASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 MIR1271-201ENST00000408537 86 ntBASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 AC244033.1-201ENST00000426826 870 ntBASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 OR1H1P-201ENST00000448731 937 ntBASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 RBMY2TP-201ENST00000451162 947 ntBASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 AL591473.1-201ENST00000464297 313 ntBASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 AC138938.1-201ENST00000515431 782 ntBASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 RN7SKP46-201ENST00000515942 234 ntBASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 AC015849.6-201ENST00000605454 474 ntBASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 AC090510.2-201ENST00000617465 629 ntBASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 AC087385.3-201ENST00000620477 187 ntBASIC5.28□□□□□ -1.56
CCDC65Q8IXS2 AL596275.2-204ENST00000641628 552 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms