Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC6.73□□□□□ -1.33
RNF43Q68DV7 AL352979.3-201ENST00000553515 247 ntBASIC6.73□□□□□ -1.33
RNF43Q68DV7 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.73□□□□□ -1.33
RNF43Q68DV7 AC012182.1-201ENST00000570133 895 ntBASIC6.73□□□□□ -1.33
RNF43Q68DV7 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC6.73□□□□□ -1.33
RNF43Q68DV7 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.73□□□□□ -1.33
RNF43Q68DV7 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC6.73□□□□□ -1.33
RNF43Q68DV7 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.73□□□□□ -1.33
RNF43Q68DV7 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC6.73□□□□□ -1.33
RNF43Q68DV7 Y_RNA.812-201ENST00000610788 101 ntBASIC6.73□□□□□ -1.33
RNF43Q68DV7 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.73□□□□□ -1.33
RNF43Q68DV7 Y_RNA.784-201ENST00000613803 101 ntBASIC6.73□□□□□ -1.33
RNF43Q68DV7 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.73□□□□□ -1.33
RNF43Q68DV7 MIR7844-201ENST00000616161 122 ntBASIC6.73□□□□□ -1.33
RNF43Q68DV7 Y_RNA.787-201ENST00000616522 101 ntBASIC6.73□□□□□ -1.33
RNF43Q68DV7 Y_RNA.780-201ENST00000617336 101 ntBASIC6.73□□□□□ -1.33
RNF43Q68DV7 Y_RNA.801-201ENST00000619005 101 ntBASIC6.73□□□□□ -1.33
RNF43Q68DV7 AL133370.2-201ENST00000619934 439 ntBASIC6.73□□□□□ -1.33
RNF43Q68DV7 AC002550.2-201ENST00000621246 394 ntBASIC6.73□□□□□ -1.33
RNF43Q68DV7 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.73□□□□□ -1.33
RNF43Q68DV7 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.73□□□□□ -1.33
RNF43Q68DV7 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RNF43Q68DV7 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
RNF43Q68DV7 LCOR-201ENST00000286067 4542 ntBASIC6.73□□□□□ -1.33
RNF43Q68DV7 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RNF43Q68DV7 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RNF43Q68DV7 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.73□□□□□ -1.33
RNF43Q68DV7 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RNF43Q68DV7 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
RNF43Q68DV7 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
RNF43Q68DV7 AC005539.1-201ENST00000443768 1479 ntBASIC6.73□□□□□ -1.33
RNF43Q68DV7 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RNF43Q68DV7 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RNF43Q68DV7 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
RNF43Q68DV7 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RNF43Q68DV7 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RNF43Q68DV7 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
RNF43Q68DV7 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
RNF43Q68DV7 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.72□□□□□ -1.33
RNF43Q68DV7 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RNF43Q68DV7 RNU5A-6P-201ENST00000384136 116 ntBASIC6.72□□□□□ -1.33
RNF43Q68DV7 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RNF43Q68DV7 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.72□□□□□ -1.33
RNF43Q68DV7 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.72□□□□□ -1.33
RNF43Q68DV7 SNORA77.2-201ENST00000408571 112 ntBASIC6.72□□□□□ -1.33
RNF43Q68DV7 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC6.72□□□□□ -1.33
RNF43Q68DV7 BX322784.1-201ENST00000455793 1077 ntBASIC6.72□□□□□ -1.33
RNF43Q68DV7 SETP20-201ENST00000457046 852 ntBASIC6.72□□□□□ -1.33
RNF43Q68DV7 RN7SL39P-201ENST00000462264 297 ntBASIC6.72□□□□□ -1.33
RNF43Q68DV7 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC6.72□□□□□ -1.33
RNF43Q68DV7 RPL19P11-201ENST00000495944 589 ntBASIC6.72□□□□□ -1.33
RNF43Q68DV7 AC131392.1-201ENST00000506490 633 ntBASIC6.72□□□□□ -1.33
RNF43Q68DV7 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.72□□□□□ -1.33
RNF43Q68DV7 AC087360.1-201ENST00000518788 616 ntBASIC6.72□□□□□ -1.33
RNF43Q68DV7 IGHV3-57-201ENST00000520143 280 ntBASIC6.72□□□□□ -1.33
RNF43Q68DV7 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.72□□□□□ -1.33
RNF43Q68DV7 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.72□□□□□ -1.33
RNF43Q68DV7 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC6.72□□□□□ -1.33
RNF43Q68DV7 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.72□□□□□ -1.33
RNF43Q68DV7 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC6.72□□□□□ -1.33
RNF43Q68DV7 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.72□□□□□ -1.33
RNF43Q68DV7 AL353726.1-201ENST00000614041 1000 ntBASIC6.72□□□□□ -1.33
RNF43Q68DV7 U1.41-201ENST00000617626 165 ntBASIC6.72□□□□□ -1.33
RNF43Q68DV7 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.72□□□□□ -1.33
RNF43Q68DV7 AC010338.1-201ENST00000621823 717 ntBASIC6.72□□□□□ -1.33
RNF43Q68DV7 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC6.72□□□□□ -1.33
RNF43Q68DV7 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC6.72□□□□□ -1.33
RNF43Q68DV7 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RNF43Q68DV7 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
RNF43Q68DV7 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.72□□□□□ -1.33
RNF43Q68DV7 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RNF43Q68DV7 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RNF43Q68DV7 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.72□□□□□ -1.33
RNF43Q68DV7 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RNF43Q68DV7 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RNF43Q68DV7 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.72□□□□□ -1.33
RNF43Q68DV7 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
RNF43Q68DV7 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
RNF43Q68DV7 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
RNF43Q68DV7 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
RNF43Q68DV7 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.33
RNF43Q68DV7 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC6.71□□□□□ -1.33
RNF43Q68DV7 TTC41P-205ENST00000551270 3963 ntBASIC6.71□□□□□ -1.33
RNF43Q68DV7 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
RNF43Q68DV7 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.71□□□□□ -1.33
RNF43Q68DV7 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
RNF43Q68DV7 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
RNF43Q68DV7 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
RNF43Q68DV7 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
RNF43Q68DV7 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RNF43Q68DV7 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.71□□□□□ -1.34
RNF43Q68DV7 SNORD8-201ENST00000363915 110 ntBASIC6.71□□□□□ -1.34
RNF43Q68DV7 RNA5SP77-201ENST00000365394 120 ntBASIC6.71□□□□□ -1.34
RNF43Q68DV7 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.71□□□□□ -1.34
RNF43Q68DV7 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
RNF43Q68DV7 RPL31P1-201ENST00000398116 372 ntBASIC6.71□□□□□ -1.34
RNF43Q68DV7 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RNF43Q68DV7 DNAJC19P6-201ENST00000401853 280 ntBASIC6.71□□□□□ -1.34
RNF43Q68DV7 CCNG1P1-201ENST00000406783 885 ntBASIC6.71□□□□□ -1.34
RNF43Q68DV7 AC116036.1-201ENST00000412199 367 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms