Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 ELOCP34-201ENST00000604436 327 ntBASIC5.49□□□□□ -1.53
RNF220Q5VTB9 AC092106.3-201ENST00000611308 722 ntBASIC5.49□□□□□ -1.53
RNF220Q5VTB9 AC231759.1-201ENST00000616455 597 ntBASIC5.49□□□□□ -1.53
RNF220Q5VTB9 HTR1DP1-201ENST00000616500 888 ntBASIC5.49□□□□□ -1.53
RNF220Q5VTB9 AL445670.1-201ENST00000618889 801 ntBASIC5.49□□□□□ -1.53
RNF220Q5VTB9 AL157770.1-201ENST00000623049 439 ntBASIC5.49□□□□□ -1.53
RNF220Q5VTB9 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 RBMY1HP-201ENST00000382759 1389 ntBASIC5.49□□□□□ -1.53
RNF220Q5VTB9 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 TRIM51GP-201ENST00000534741 1350 ntBASIC5.49□□□□□ -1.53
RNF220Q5VTB9 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RNF220Q5VTB9 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 AC092162.3-201ENST00000624511 1624 ntBASIC5.48□□□□□ -1.53
RNF220Q5VTB9 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 AC026523.2-201ENST00000625039 7739 ntBASIC5.48□□□□□ -1.53
RNF220Q5VTB9 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 RN7SKP250-201ENST00000363924 321 ntBASIC5.48□□□□□ -1.53
RNF220Q5VTB9 RNU6-707P-201ENST00000364647 95 ntBASIC5.48□□□□□ -1.53
RNF220Q5VTB9 RPL11P3-201ENST00000395256 523 ntBASIC5.48□□□□□ -1.53
RNF220Q5VTB9 OOSP1-201ENST00000398992 1270 ntBASIC5.48□□□□□ -1.53
RNF220Q5VTB9 MTND4P13-201ENST00000402078 1023 ntBASIC5.48□□□□□ -1.53
RNF220Q5VTB9 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 RPL6P29-201ENST00000414863 865 ntBASIC5.48□□□□□ -1.53
RNF220Q5VTB9 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 FAM183DP-201ENST00000421987 399 ntBASIC5.48□□□□□ -1.53
RNF220Q5VTB9 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 TNPO1P1-201ENST00000423641 1138 ntBASIC5.48□□□□□ -1.53
RNF220Q5VTB9 AC113412.1-201ENST00000425840 504 ntBASIC5.48□□□□□ -1.53
RNF220Q5VTB9 AC092013.1-201ENST00000438795 332 ntBASIC5.48□□□□□ -1.53
RNF220Q5VTB9 ACTR3P2-201ENST00000439585 1257 ntBASIC5.48□□□□□ -1.53
RNF220Q5VTB9 RPS7P3-201ENST00000443360 580 ntBASIC5.48□□□□□ -1.53
RNF220Q5VTB9 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.48□□□□□ -1.53
RNF220Q5VTB9 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 USP9YP25-201ENST00000457708 443 ntBASIC5.48□□□□□ -1.53
RNF220Q5VTB9 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 PFN1P6-201ENST00000476786 399 ntBASIC5.48□□□□□ -1.53
RNF220Q5VTB9 AC015724.1-201ENST00000478577 156 ntBASIC5.48□□□□□ -1.53
RNF220Q5VTB9 AC090114.3-201ENST00000479267 829 ntBASIC5.48□□□□□ -1.53
RNF220Q5VTB9 RPL38P3-201ENST00000484463 213 ntBASIC5.48□□□□□ -1.53
RNF220Q5VTB9 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 RPL7L1P4-201ENST00000513004 707 ntBASIC5.48□□□□□ -1.53
RNF220Q5VTB9 PRMT5P1-201ENST00000514351 598 ntBASIC5.48□□□□□ -1.53
RNF220Q5VTB9 RNA5SP441-201ENST00000516809 88 ntBASIC5.48□□□□□ -1.53
RNF220Q5VTB9 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 MTATP6P15-201ENST00000527233 835 ntBASIC5.48□□□□□ -1.53
RNF220Q5VTB9 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 AL121594.2-201ENST00000541658 472 ntBASIC5.48□□□□□ -1.53
RNF220Q5VTB9 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 AL442163.2-201ENST00000553912 710 ntBASIC5.48□□□□□ -1.53
RNF220Q5VTB9 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 ARGFXP2-201ENST00000579304 949 ntBASIC5.48□□□□□ -1.53
RNF220Q5VTB9 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 PCNAP1-202ENST00000595299 752 ntBASIC5.48□□□□□ -1.53
RNF220Q5VTB9 VN1R78P-201ENST00000597393 564 ntBASIC5.48□□□□□ -1.53
RNF220Q5VTB9 AC011500.1-201ENST00000601963 469 ntBASIC5.48□□□□□ -1.53
RNF220Q5VTB9 uc_338.29-201ENST00000615099 168 ntBASIC5.48□□□□□ -1.53
RNF220Q5VTB9 AC120349.3-201ENST00000624377 529 ntBASIC5.48□□□□□ -1.53
RNF220Q5VTB9 AC019226.2-201ENST00000625973 424 ntBASIC5.48□□□□□ -1.53
RNF220Q5VTB9 AC073488.6-201ENST00000632293 754 ntBASIC5.48□□□□□ -1.53
RNF220Q5VTB9 AC136428.4-201ENST00000634254 1155 ntBASIC5.48□□□□□ -1.53
RNF220Q5VTB9 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 PCAT14-202ENST00000627127 3935 ntBASIC5.48□□□□□ -1.53
RNF220Q5VTB9 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RNF220Q5VTB9 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RNF220Q5VTB9 AL355852.1-201ENST00000454081 1771 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms