Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.7□□□□□ -1.66
SCN1BQ07699 AC134669.1-201ENST00000581275 672 ntBASIC4.7□□□□□ -1.66
SCN1BQ07699 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.7□□□□□ -1.66
SCN1BQ07699 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC4.7□□□□□ -1.66
SCN1BQ07699 AC012254.4-201ENST00000588843 273 ntBASIC4.7□□□□□ -1.66
SCN1BQ07699 PCNAP1-202ENST00000595299 752 ntBASIC4.7□□□□□ -1.66
SCN1BQ07699 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC4.7□□□□□ -1.66
SCN1BQ07699 AL031601.1-201ENST00000605702 394 ntBASIC4.7□□□□□ -1.66
SCN1BQ07699 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.7□□□□□ -1.66
SCN1BQ07699 AC244107.2-201ENST00000611773 76 ntBASIC4.7□□□□□ -1.66
SCN1BQ07699 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.7□□□□□ -1.66
SCN1BQ07699 RN7SL544P-201ENST00000617232 284 ntBASIC4.7□□□□□ -1.66
SCN1BQ07699 RN7SL763P-201ENST00000620922 284 ntBASIC4.7□□□□□ -1.66
SCN1BQ07699 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.7□□□□□ -1.66
SCN1BQ07699 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.7□□□□□ -1.66
SCN1BQ07699 ATE1-AS1-202ENST00000636460 506 ntBASIC4.7□□□□□ -1.66
SCN1BQ07699 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SCN1BQ07699 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SCN1BQ07699 HSPA8P19-201ENST00000505359 1517 ntBASIC4.7□□□□□ -1.66
SCN1BQ07699 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SCN1BQ07699 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SCN1BQ07699 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SCN1BQ07699 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
SCN1BQ07699 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SCN1BQ07699 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SCN1BQ07699 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.7□□□□□ -1.66
SCN1BQ07699 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.7□□□□□ -1.66
SCN1BQ07699 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
SCN1BQ07699 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
SCN1BQ07699 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
SCN1BQ07699 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SCN1BQ07699 USP9YP4-201ENST00000424401 1745 ntBASIC4.69□□□□□ -1.66
SCN1BQ07699 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.69□□□□□ -1.66
SCN1BQ07699 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SCN1BQ07699 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
SCN1BQ07699 AC092162.3-201ENST00000624511 1624 ntBASIC4.69□□□□□ -1.66
SCN1BQ07699 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
SCN1BQ07699 SRRM1P3-201ENST00000426911 2678 ntBASIC4.69□□□□□ -1.66
SCN1BQ07699 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SCN1BQ07699 RNA5SP30-201ENST00000365552 115 ntBASIC4.69□□□□□ -1.66
SCN1BQ07699 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.69□□□□□ -1.66
SCN1BQ07699 HMGB1P20-201ENST00000402555 677 ntBASIC4.69□□□□□ -1.66
SCN1BQ07699 MTATP6P31-201ENST00000406985 692 ntBASIC4.69□□□□□ -1.66
SCN1BQ07699 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.69□□□□□ -1.66
SCN1BQ07699 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.69□□□□□ -1.66
SCN1BQ07699 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SCN1BQ07699 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.69□□□□□ -1.66
SCN1BQ07699 AC006335.2-201ENST00000437993 330 ntBASIC4.69□□□□□ -1.66
SCN1BQ07699 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.69□□□□□ -1.66
SCN1BQ07699 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.69□□□□□ -1.66
SCN1BQ07699 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.69□□□□□ -1.66
SCN1BQ07699 AP000281.1-201ENST00000444036 316 ntBASIC4.69□□□□□ -1.66
SCN1BQ07699 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SCN1BQ07699 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.69□□□□□ -1.66
SCN1BQ07699 AP000547.1-201ENST00000454360 617 ntBASIC4.69□□□□□ -1.66
SCN1BQ07699 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.69□□□□□ -1.66
SCN1BQ07699 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SCN1BQ07699 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.69□□□□□ -1.66
SCN1BQ07699 AC008628.1-201ENST00000508663 265 ntBASIC4.69□□□□□ -1.66
SCN1BQ07699 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SCN1BQ07699 RNA5SP271-201ENST00000516700 88 ntBASIC4.69□□□□□ -1.66
SCN1BQ07699 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.69□□□□□ -1.66
SCN1BQ07699 AC060775.1-201ENST00000518241 520 ntBASIC4.69□□□□□ -1.66
SCN1BQ07699 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.69□□□□□ -1.66
SCN1BQ07699 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.69□□□□□ -1.66
SCN1BQ07699 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.69□□□□□ -1.66
SCN1BQ07699 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.69□□□□□ -1.66
SCN1BQ07699 AP005403.1-201ENST00000579720 229 ntBASIC4.69□□□□□ -1.66
SCN1BQ07699 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
SCN1BQ07699 AC079315.1-201ENST00000602952 623 ntBASIC4.69□□□□□ -1.66
SCN1BQ07699 AC093765.1-201ENST00000603758 881 ntBASIC4.69□□□□□ -1.66
SCN1BQ07699 RPL21P136-201ENST00000605378 396 ntBASIC4.69□□□□□ -1.66
SCN1BQ07699 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC4.69□□□□□ -1.66
SCN1BQ07699 U6.107-201ENST00000637108 79 ntBASIC4.69□□□□□ -1.66
SCN1BQ07699 AC008691.1-209ENST00000642094 814 ntBASIC4.69□□□□□ -1.66
SCN1BQ07699 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SCN1BQ07699 AC106872.5-201ENST00000508856 1416 ntBASIC4.69□□□□□ -1.66
SCN1BQ07699 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.69□□□□□ -1.66
SCN1BQ07699 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SCN1BQ07699 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SCN1BQ07699 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SCN1BQ07699 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SCN1BQ07699 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SCN1BQ07699 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.68□□□□□ -1.66
SCN1BQ07699 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SCN1BQ07699 AC017007.4-201ENST00000503353 1352 ntBASIC4.68□□□□□ -1.66
SCN1BQ07699 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SCN1BQ07699 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SCN1BQ07699 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SCN1BQ07699 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SCN1BQ07699 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SCN1BQ07699 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SCN1BQ07699 MIR375-201ENST00000362103 64 ntBASIC4.68□□□□□ -1.66
SCN1BQ07699 RNU1-150P-201ENST00000362491 162 ntBASIC4.68□□□□□ -1.66
SCN1BQ07699 RN7SKP153-201ENST00000365026 316 ntBASIC4.68□□□□□ -1.66
SCN1BQ07699 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.68□□□□□ -1.66
SCN1BQ07699 OR7E101P-201ENST00000400428 513 ntBASIC4.68□□□□□ -1.66
SCN1BQ07699 RN7SKP16-201ENST00000410180 299 ntBASIC4.68□□□□□ -1.66
SCN1BQ07699 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.68□□□□□ -1.66
SCN1BQ07699 TNPO1P1-201ENST00000423641 1138 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms