Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.54□□□□□ -1.68
HMGCS1Q01581 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.54□□□□□ -1.68
HMGCS1Q01581 AC097505.1-201ENST00000610199 565 ntBASIC4.54□□□□□ -1.68
HMGCS1Q01581 AP001005.3-201ENST00000622049 129 ntBASIC4.54□□□□□ -1.68
HMGCS1Q01581 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.54□□□□□ -1.68
HMGCS1Q01581 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HMGCS1Q01581 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.54□□□□□ -1.68
HMGCS1Q01581 AC139713.2-215ENST00000641428 5037 ntBASIC4.54□□□□□ -1.68
HMGCS1Q01581 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
HMGCS1Q01581 NCLP2-201ENST00000416078 1462 ntBASIC4.54□□□□□ -1.68
HMGCS1Q01581 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HMGCS1Q01581 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HMGCS1Q01581 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HMGCS1Q01581 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HMGCS1Q01581 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.53□□□□□ -1.68
HMGCS1Q01581 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
HMGCS1Q01581 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.53□□□□□ -1.68
HMGCS1Q01581 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
HMGCS1Q01581 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMGCS1Q01581 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.53□□□□□ -1.68
HMGCS1Q01581 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
HMGCS1Q01581 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HMGCS1Q01581 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMGCS1Q01581 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HMGCS1Q01581 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMGCS1Q01581 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMGCS1Q01581 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HMGCS1Q01581 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMGCS1Q01581 SNORA51.8-201ENST00000384234 132 ntBASIC4.53□□□□□ -1.68
HMGCS1Q01581 AC012519.1-201ENST00000424588 610 ntBASIC4.53□□□□□ -1.68
HMGCS1Q01581 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.53□□□□□ -1.68
HMGCS1Q01581 RPL12P3-201ENST00000440080 396 ntBASIC4.53□□□□□ -1.68
HMGCS1Q01581 SUMO2P1-206ENST00000445436 284 ntBASIC4.53□□□□□ -1.68
HMGCS1Q01581 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.53□□□□□ -1.68
HMGCS1Q01581 AC079168.2-201ENST00000453977 416 ntBASIC4.53□□□□□ -1.68
HMGCS1Q01581 AC104971.1-201ENST00000495117 578 ntBASIC4.53□□□□□ -1.68
HMGCS1Q01581 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HMGCS1Q01581 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HMGCS1Q01581 GAPDHP56-201ENST00000506031 988 ntBASIC4.53□□□□□ -1.68
HMGCS1Q01581 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.53□□□□□ -1.68
HMGCS1Q01581 BTG4P1-201ENST00000510421 183 ntBASIC4.53□□□□□ -1.68
HMGCS1Q01581 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.53□□□□□ -1.68
HMGCS1Q01581 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.53□□□□□ -1.68
HMGCS1Q01581 AC005000.1-201ENST00000536192 288 ntBASIC4.53□□□□□ -1.68
HMGCS1Q01581 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.53□□□□□ -1.68
HMGCS1Q01581 AC015912.2-201ENST00000571053 181 ntBASIC4.53□□□□□ -1.68
HMGCS1Q01581 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC4.53□□□□□ -1.68
HMGCS1Q01581 AC005520.3-201ENST00000602874 370 ntBASIC4.53□□□□□ -1.68
HMGCS1Q01581 AC073137.1-201ENST00000605636 634 ntBASIC4.53□□□□□ -1.68
HMGCS1Q01581 AL159169.2-201ENST00000610061 1269 ntBASIC4.53□□□□□ -1.68
HMGCS1Q01581 AL121890.2-201ENST00000617644 465 ntBASIC4.53□□□□□ -1.68
HMGCS1Q01581 AF117829.2-201ENST00000619538 361 ntBASIC4.53□□□□□ -1.68
HMGCS1Q01581 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.53□□□□□ -1.68
HMGCS1Q01581 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HMGCS1Q01581 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HMGCS1Q01581 AC093775.1-201ENST00000624154 1868 ntBASIC4.53□□□□□ -1.68
HMGCS1Q01581 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMGCS1Q01581 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMGCS1Q01581 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMGCS1Q01581 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.53□□□□□ -1.68
HMGCS1Q01581 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
HMGCS1Q01581 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.53□□□□□ -1.68
HMGCS1Q01581 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMGCS1Q01581 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMGCS1Q01581 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.53□□□□□ -1.69
HMGCS1Q01581 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMGCS1Q01581 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HMGCS1Q01581 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMGCS1Q01581 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
HMGCS1Q01581 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.52□□□□□ -1.69
HMGCS1Q01581 AL442639.1-201ENST00000625030 1899 ntBASIC4.52□□□□□ -1.69
HMGCS1Q01581 AC021242.1-201ENST00000507315 2035 ntBASIC4.52□□□□□ -1.69
HMGCS1Q01581 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMGCS1Q01581 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.52□□□□□ -1.69
HMGCS1Q01581 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.52□□□□□ -1.69
HMGCS1Q01581 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.52□□□□□ -1.69
HMGCS1Q01581 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
HMGCS1Q01581 RNU1-6P-201ENST00000516290 144 ntBASIC4.52□□□□□ -1.69
HMGCS1Q01581 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.52□□□□□ -1.69
HMGCS1Q01581 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.52□□□□□ -1.69
HMGCS1Q01581 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.52□□□□□ -1.69
HMGCS1Q01581 AC018552.1-201ENST00000562099 811 ntBASIC4.52□□□□□ -1.69
HMGCS1Q01581 OR1F2P-201ENST00000570470 933 ntBASIC4.52□□□□□ -1.69
HMGCS1Q01581 AC115989.2-201ENST00000578640 563 ntBASIC4.52□□□□□ -1.69
HMGCS1Q01581 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.52□□□□□ -1.69
HMGCS1Q01581 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.52□□□□□ -1.69
HMGCS1Q01581 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.52□□□□□ -1.69
HMGCS1Q01581 AC067838.1-201ENST00000606064 577 ntBASIC4.52□□□□□ -1.69
HMGCS1Q01581 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.52□□□□□ -1.69
HMGCS1Q01581 AC022960.2-201ENST00000616300 666 ntBASIC4.52□□□□□ -1.69
HMGCS1Q01581 AC005086.4-201ENST00000623065 213 ntBASIC4.52□□□□□ -1.69
HMGCS1Q01581 AC011815.3-201ENST00000624194 473 ntBASIC4.52□□□□□ -1.69
HMGCS1Q01581 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.52□□□□□ -1.69
HMGCS1Q01581 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.52□□□□□ -1.69
HMGCS1Q01581 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMGCS1Q01581 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HMGCS1Q01581 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HMGCS1Q01581 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.52□□□□□ -1.69
HMGCS1Q01581 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMGCS1Q01581 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms