Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
UBA52P62987 MIR448-201ENST00000362131 111 ntBASIC4.18□□□□□ -1.74
UBA52P62987 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
UBA52P62987 FABP12P1-201ENST00000401911 322 ntBASIC4.18□□□□□ -1.74
UBA52P62987 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC4.18□□□□□ -1.74
UBA52P62987 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.18□□□□□ -1.74
UBA52P62987 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.18□□□□□ -1.74
UBA52P62987 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.18□□□□□ -1.74
UBA52P62987 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
UBA52P62987 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.18□□□□□ -1.74
UBA52P62987 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.18□□□□□ -1.74
UBA52P62987 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.18□□□□□ -1.74
UBA52P62987 AC008072.1-201ENST00000434254 824 ntBASIC4.18□□□□□ -1.74
UBA52P62987 PPIAP13-201ENST00000434706 478 ntBASIC4.18□□□□□ -1.74
UBA52P62987 PRPF38AP2-201ENST00000438179 851 ntBASIC4.18□□□□□ -1.74
UBA52P62987 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
UBA52P62987 AL450263.2-201ENST00000439400 589 ntBASIC4.18□□□□□ -1.74
UBA52P62987 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC4.18□□□□□ -1.74
UBA52P62987 RN7SL517P-201ENST00000462240 305 ntBASIC4.18□□□□□ -1.74
UBA52P62987 RPL5P30-201ENST00000465511 891 ntBASIC4.18□□□□□ -1.74
UBA52P62987 FTH1P2-201ENST00000466086 412 ntBASIC4.18□□□□□ -1.74
UBA52P62987 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
UBA52P62987 AC058823.1-201ENST00000485315 474 ntBASIC4.18□□□□□ -1.74
UBA52P62987 HMGN2P25-201ENST00000486956 268 ntBASIC4.18□□□□□ -1.74
UBA52P62987 AC104971.1-201ENST00000495117 578 ntBASIC4.18□□□□□ -1.74
UBA52P62987 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.18□□□□□ -1.74
UBA52P62987 AC006427.1-201ENST00000514359 712 ntBASIC4.18□□□□□ -1.74
UBA52P62987 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.18□□□□□ -1.74
UBA52P62987 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.18□□□□□ -1.74
UBA52P62987 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.18□□□□□ -1.74
UBA52P62987 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.18□□□□□ -1.74
UBA52P62987 AC008033.2-201ENST00000542626 177 ntBASIC4.18□□□□□ -1.74
UBA52P62987 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.18□□□□□ -1.74
UBA52P62987 NDUFB4P11-201ENST00000560510 395 ntBASIC4.18□□□□□ -1.74
UBA52P62987 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.18□□□□□ -1.74
UBA52P62987 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.18□□□□□ -1.74
UBA52P62987 AL133406.3-201ENST00000606817 541 ntBASIC4.18□□□□□ -1.74
UBA52P62987 AL158196.1-201ENST00000616786 434 ntBASIC4.18□□□□□ -1.74
UBA52P62987 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.18□□□□□ -1.74
UBA52P62987 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.18□□□□□ -1.74
UBA52P62987 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
UBA52P62987 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.18□□□□□ -1.74
UBA52P62987 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
UBA52P62987 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
UBA52P62987 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
UBA52P62987 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
UBA52P62987 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
UBA52P62987 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.17□□□□□ -1.74
UBA52P62987 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
UBA52P62987 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.17□□□□□ -1.74
UBA52P62987 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
UBA52P62987 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
UBA52P62987 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.17□□□□□ -1.74
UBA52P62987 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
UBA52P62987 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
UBA52P62987 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
UBA52P62987 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
UBA52P62987 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
UBA52P62987 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
UBA52P62987 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
UBA52P62987 RN7SKP95-201ENST00000362860 303 ntBASIC4.17□□□□□ -1.74
UBA52P62987 RNU1-83P-201ENST00000363426 164 ntBASIC4.17□□□□□ -1.74
UBA52P62987 RNVU1-6-201ENST00000364688 164 ntBASIC4.17□□□□□ -1.74
UBA52P62987 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
UBA52P62987 RNU1-74P-201ENST00000384108 171 ntBASIC4.17□□□□□ -1.74
UBA52P62987 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
UBA52P62987 AC233289.1-201ENST00000403700 508 ntBASIC4.17□□□□□ -1.74
UBA52P62987 MIR1182-201ENST00000408363 97 ntBASIC4.17□□□□□ -1.74
UBA52P62987 AL160275.2-201ENST00000412010 394 ntBASIC4.17□□□□□ -1.74
UBA52P62987 CHEK2P3-201ENST00000416118 248 ntBASIC4.17□□□□□ -1.74
UBA52P62987 AL590139.1-201ENST00000416267 400 ntBASIC4.17□□□□□ -1.74
UBA52P62987 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
UBA52P62987 EI24P4-201ENST00000423683 1078 ntBASIC4.17□□□□□ -1.74
UBA52P62987 RPS4XP16-201ENST00000427198 791 ntBASIC4.17□□□□□ -1.74
UBA52P62987 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.17□□□□□ -1.74
UBA52P62987 AL138878.2-201ENST00000440581 1241 ntBASIC4.17□□□□□ -1.74
UBA52P62987 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.17□□□□□ -1.74
UBA52P62987 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.17□□□□□ -1.74
UBA52P62987 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.17□□□□□ -1.74
UBA52P62987 AC002553.2-201ENST00000453217 340 ntBASIC4.17□□□□□ -1.74
UBA52P62987 AC010469.1-201ENST00000463864 576 ntBASIC4.17□□□□□ -1.74
UBA52P62987 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.17□□□□□ -1.74
UBA52P62987 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.17□□□□□ -1.74
UBA52P62987 RAB9BP1-201ENST00000519581 626 ntBASIC4.17□□□□□ -1.74
UBA52P62987 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
UBA52P62987 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.17□□□□□ -1.74
UBA52P62987 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.17□□□□□ -1.74
UBA52P62987 AC009117.1-201ENST00000563948 554 ntBASIC4.17□□□□□ -1.74
UBA52P62987 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.17□□□□□ -1.74
UBA52P62987 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.17□□□□□ -1.74
UBA52P62987 MIR4697-201ENST00000582977 78 ntBASIC4.17□□□□□ -1.74
UBA52P62987 MIR4691-201ENST00000583764 85 ntBASIC4.17□□□□□ -1.74
UBA52P62987 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.17□□□□□ -1.74
UBA52P62987 BNIP3P35-201ENST00000604530 490 ntBASIC4.17□□□□□ -1.74
UBA52P62987 AL161616.1-201ENST00000611867 286 ntBASIC4.17□□□□□ -1.74
UBA52P62987 AC073575.2-201ENST00000614212 627 ntBASIC4.17□□□□□ -1.74
UBA52P62987 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC4.17□□□□□ -1.74
UBA52P62987 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
UBA52P62987 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
UBA52P62987 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms