Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 RNU6-697P-201ENST00000363348 107 ntBASIC4.93□□□□□ -1.62
CDH4P55283 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.93□□□□□ -1.62
CDH4P55283 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CDH4P55283 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CDH4P55283 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.93□□□□□ -1.62
CDH4P55283 AL645608.4-201ENST00000423619 154 ntBASIC4.93□□□□□ -1.62
CDH4P55283 BTG3P1-201ENST00000435859 716 ntBASIC4.93□□□□□ -1.62
CDH4P55283 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.93□□□□□ -1.62
CDH4P55283 BTF3P6-201ENST00000448054 499 ntBASIC4.93□□□□□ -1.62
CDH4P55283 RPL7L1P1-201ENST00000448259 785 ntBASIC4.93□□□□□ -1.62
CDH4P55283 AC011005.3-201ENST00000491624 395 ntBASIC4.93□□□□□ -1.62
CDH4P55283 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.93□□□□□ -1.62
CDH4P55283 SOX5P1-201ENST00000524155 1127 ntBASIC4.93□□□□□ -1.62
CDH4P55283 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDH4P55283 AC011270.1-201ENST00000558606 583 ntBASIC4.93□□□□□ -1.62
CDH4P55283 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.93□□□□□ -1.62
CDH4P55283 AC084759.1-201ENST00000561168 290 ntBASIC4.93□□□□□ -1.62
CDH4P55283 AL390726.5-202ENST00000564800 256 ntBASIC4.93□□□□□ -1.62
CDH4P55283 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.93□□□□□ -1.62
CDH4P55283 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.93□□□□□ -1.62
CDH4P55283 AL135786.2-201ENST00000608422 615 ntBASIC4.93□□□□□ -1.62
CDH4P55283 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.93□□□□□ -1.62
CDH4P55283 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CDH4P55283 AC107021.2-201ENST00000567714 2095 ntBASIC4.93□□□□□ -1.62
CDH4P55283 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.93□□□□□ -1.62
CDH4P55283 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CDH4P55283 DDX18P5-201ENST00000534547 1306 ntBASIC4.93□□□□□ -1.62
CDH4P55283 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CDH4P55283 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH4P55283 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDH4P55283 AP000542.2-201ENST00000623199 6179 ntBASIC4.92□□□□□ -1.62
CDH4P55283 RLIMP2-201ENST00000427891 1563 ntBASIC4.92□□□□□ -1.62
CDH4P55283 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH4P55283 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH4P55283 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CDH4P55283 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CDH4P55283 RSU1P3-201ENST00000412878 835 ntBASIC4.92□□□□□ -1.62
CDH4P55283 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.92□□□□□ -1.62
CDH4P55283 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.92□□□□□ -1.62
CDH4P55283 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.92□□□□□ -1.62
CDH4P55283 AC005154.2-201ENST00000438110 379 ntBASIC4.92□□□□□ -1.62
CDH4P55283 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.92□□□□□ -1.62
CDH4P55283 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.92□□□□□ -1.62
CDH4P55283 NPM1P29-201ENST00000483112 803 ntBASIC4.92□□□□□ -1.62
CDH4P55283 RPS23P1-201ENST00000491662 432 ntBASIC4.92□□□□□ -1.62
CDH4P55283 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.92□□□□□ -1.62
CDH4P55283 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.92□□□□□ -1.62
CDH4P55283 RPS27AP18-201ENST00000515536 459 ntBASIC4.92□□□□□ -1.62
CDH4P55283 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.92□□□□□ -1.62
CDH4P55283 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDH4P55283 AC122134.1-201ENST00000565664 1104 ntBASIC4.92□□□□□ -1.62
CDH4P55283 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.92□□□□□ -1.62
CDH4P55283 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.92□□□□□ -1.62
CDH4P55283 MIR4270-201ENST00000581799 70 ntBASIC4.92□□□□□ -1.62
CDH4P55283 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.92□□□□□ -1.62
CDH4P55283 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH4P55283 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH4P55283 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH4P55283 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.92□□□□□ -1.62
CDH4P55283 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.92□□□□□ -1.62
CDH4P55283 ZFRP1-201ENST00000457579 2970 ntBASIC4.92□□□□□ -1.62
CDH4P55283 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDH4P55283 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.92□□□□□ -1.62
CDH4P55283 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDH4P55283 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CDH4P55283 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
CDH4P55283 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CDH4P55283 RBPJP2-201ENST00000618187 1444 ntBASIC4.91□□□□□ -1.62
CDH4P55283 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDH4P55283 AC233289.1-201ENST00000403700 508 ntBASIC4.91□□□□□ -1.62
CDH4P55283 TMBIM7P-201ENST00000418074 855 ntBASIC4.91□□□□□ -1.62
CDH4P55283 VN1R37P-201ENST00000419096 748 ntBASIC4.91□□□□□ -1.62
CDH4P55283 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.91□□□□□ -1.62
CDH4P55283 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH4P55283 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH4P55283 AL450263.2-201ENST00000439400 589 ntBASIC4.91□□□□□ -1.62
CDH4P55283 Z80107.2-201ENST00000445127 392 ntBASIC4.91□□□□□ -1.62
CDH4P55283 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH4P55283 AL591363.1-201ENST00000450091 483 ntBASIC4.91□□□□□ -1.62
CDH4P55283 AC006967.1-201ENST00000467608 589 ntBASIC4.91□□□□□ -1.62
CDH4P55283 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDH4P55283 AC091868.1-201ENST00000508746 304 ntBASIC4.91□□□□□ -1.62
CDH4P55283 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH4P55283 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CDH4P55283 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.91□□□□□ -1.62
CDH4P55283 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH4P55283 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH4P55283 AC093249.4-201ENST00000564755 259 ntBASIC4.91□□□□□ -1.62
CDH4P55283 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.91□□□□□ -1.62
CDH4P55283 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH4P55283 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH4P55283 OR7M1P-201ENST00000608946 533 ntBASIC4.91□□□□□ -1.62
CDH4P55283 AL442639.1-201ENST00000625030 1899 ntBASIC4.91□□□□□ -1.62
CDH4P55283 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDH4P55283 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH4P55283 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH4P55283 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.91□□□□□ -1.62
CDH4P55283 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
CDH4P55283 AL034370.1-201ENST00000397254 1590 ntBASIC4.91□□□□□ -1.62
CDH4P55283 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms