Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC6.81□□□□□ -1.32
RNF144AP50876 HMGB1P24-202ENST00000615653 685 ntBASIC6.81□□□□□ -1.32
RNF144AP50876 RFPL4AP6-201ENST00000616792 846 ntBASIC6.81□□□□□ -1.32
RNF144AP50876 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
RNF144AP50876 AC243830.2-201ENST00000618067 630 ntBASIC6.81□□□□□ -1.32
RNF144AP50876 U4.1-201ENST00000620349 87 ntBASIC6.81□□□□□ -1.32
RNF144AP50876 ERCC6-202ENST00000374127 1782 ntBASIC6.81□□□□□ -1.32
RNF144AP50876 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
RNF144AP50876 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RNF144AP50876 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
RNF144AP50876 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RNF144AP50876 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RNF144AP50876 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
RNF144AP50876 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC6.81□□□□□ -1.32
RNF144AP50876 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.81□□□□□ -1.32
RNF144AP50876 EEF1A1P26-201ENST00000458319 1363 ntBASIC6.81□□□□□ -1.32
RNF144AP50876 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
RNF144AP50876 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RNF144AP50876 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
RNF144AP50876 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.81□□□□□ -1.32
RNF144AP50876 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RNF144AP50876 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RNF144AP50876 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RNF144AP50876 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RNF144AP50876 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RNF144AP50876 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC6.8□□□□□ -1.32
RNF144AP50876 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RNF144AP50876 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RNF144AP50876 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RNF144AP50876 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.8□□□□□ -1.32
RNF144AP50876 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC6.8□□□□□ -1.32
RNF144AP50876 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.8□□□□□ -1.32
RNF144AP50876 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
RNF144AP50876 RNU6-289P-201ENST00000364093 107 ntBASIC6.8□□□□□ -1.32
RNF144AP50876 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RNF144AP50876 SSX6-201ENST00000376932 562 ntBASIC6.8□□□□□ -1.32
RNF144AP50876 MIR128-2-201ENST00000384893 84 ntBASIC6.8□□□□□ -1.32
RNF144AP50876 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
RNF144AP50876 RNU6-308P-201ENST00000390957 107 ntBASIC6.8□□□□□ -1.32
RNF144AP50876 CD3D-202ENST00000392884 476 ntTSL 2 BASIC6.8□□□□□ -1.32
RNF144AP50876 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.8□□□□□ -1.32
RNF144AP50876 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.8□□□□□ -1.32
RNF144AP50876 RNU2-9P-201ENST00000410194 145 ntBASIC6.8□□□□□ -1.32
RNF144AP50876 RNU6-847P-201ENST00000411115 108 ntBASIC6.8□□□□□ -1.32
RNF144AP50876 RNU4-61P-201ENST00000411243 107 ntBASIC6.8□□□□□ -1.32
RNF144AP50876 IFNA12P-201ENST00000413147 571 ntBASIC6.8□□□□□ -1.32
RNF144AP50876 AC009237.9-201ENST00000414800 347 ntBASIC6.8□□□□□ -1.32
RNF144AP50876 AC234782.4-201ENST00000417646 1048 ntBASIC6.8□□□□□ -1.32
RNF144AP50876 AC023141.1-201ENST00000419418 379 ntBASIC6.8□□□□□ -1.32
RNF144AP50876 AL451054.2-201ENST00000420896 202 ntBASIC6.8□□□□□ -1.32
RNF144AP50876 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC6.8□□□□□ -1.32
RNF144AP50876 PMCHL1-202ENST00000423102 261 ntBASIC6.8□□□□□ -1.32
RNF144AP50876 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC6.8□□□□□ -1.32
RNF144AP50876 DUTP6-201ENST00000425573 462 ntBASIC6.8□□□□□ -1.32
RNF144AP50876 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC6.8□□□□□ -1.32
RNF144AP50876 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.8□□□□□ -1.32
RNF144AP50876 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.8□□□□□ -1.32
RNF144AP50876 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC6.8□□□□□ -1.32
RNF144AP50876 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RNF144AP50876 SBDSP1-204ENST00000453858 737 ntBASIC6.8□□□□□ -1.32
RNF144AP50876 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RNF144AP50876 RPS27P23-201ENST00000487608 251 ntBASIC6.8□□□□□ -1.32
RNF144AP50876 AL035404.1-201ENST00000497982 568 ntBASIC6.8□□□□□ -1.32
RNF144AP50876 NUP58P1-201ENST00000502546 1738 ntBASIC6.8□□□□□ -1.32
RNF144AP50876 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC6.8□□□□□ -1.32
RNF144AP50876 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
RNF144AP50876 NCOA4P3-201ENST00000513203 1877 ntBASIC6.8□□□□□ -1.32
RNF144AP50876 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.8□□□□□ -1.32
RNF144AP50876 SNORA25.17-201ENST00000517184 124 ntBASIC6.8□□□□□ -1.32
RNF144AP50876 OR8A2P-201ENST00000528631 952 ntBASIC6.8□□□□□ -1.32
RNF144AP50876 SNRPGP18-201ENST00000553000 214 ntBASIC6.8□□□□□ -1.32
RNF144AP50876 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.8□□□□□ -1.32
RNF144AP50876 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC6.8□□□□□ -1.32
RNF144AP50876 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC6.8□□□□□ -1.32
RNF144AP50876 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RNF144AP50876 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC6.8□□□□□ -1.32
RNF144AP50876 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC6.8□□□□□ -1.32
RNF144AP50876 Z84480.1-201ENST00000605131 311 ntBASIC6.8□□□□□ -1.32
RNF144AP50876 AC092807.2-201ENST00000609367 243 ntBASIC6.8□□□□□ -1.32
RNF144AP50876 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC6.8□□□□□ -1.32
RNF144AP50876 MIR7162-201ENST00000611134 69 ntBASIC6.8□□□□□ -1.32
RNF144AP50876 AL121809.2-201ENST00000613169 341 ntBASIC6.8□□□□□ -1.32
RNF144AP50876 AC006335.3-201ENST00000613408 292 ntBASIC6.8□□□□□ -1.32
RNF144AP50876 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC6.8□□□□□ -1.32
RNF144AP50876 AL354950.2-201ENST00000617939 290 ntBASIC6.8□□□□□ -1.32
RNF144AP50876 AC092111.1-201ENST00000618256 3358 ntBASIC6.8□□□□□ -1.32
RNF144AP50876 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC6.8□□□□□ -1.32
RNF144AP50876 AL355480.4-201ENST00000626823 69 ntBASIC6.8□□□□□ -1.32
RNF144AP50876 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC6.8□□□□□ -1.32
RNF144AP50876 AL590396.3-201ENST00000636334 300 ntBASIC6.8□□□□□ -1.32
RNF144AP50876 AC034111.1-201ENST00000562143 3770 ntBASIC6.8□□□□□ -1.32
RNF144AP50876 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
RNF144AP50876 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RNF144AP50876 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RNF144AP50876 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RNF144AP50876 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RNF144AP50876 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RNF144AP50876 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
RNF144AP50876 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RNF144AP50876 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms