Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AF117829.2-201ENST00000619538 361 ntBASIC4.91□□□□□ -1.62
SLC1A1P43005 AC074140.1-201ENST00000621617 208 ntBASIC4.91□□□□□ -1.62
SLC1A1P43005 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.91□□□□□ -1.62
SLC1A1P43005 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.91□□□□□ -1.62
SLC1A1P43005 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC1A1P43005 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.91□□□□□ -1.62
SLC1A1P43005 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.91□□□□□ -1.62
SLC1A1P43005 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC1A1P43005 DDX18P4-201ENST00000511690 1966 ntBASIC4.91□□□□□ -1.62
SLC1A1P43005 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SLC1A1P43005 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC1A1P43005 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.91□□□□□ -1.62
SLC1A1P43005 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SLC1A1P43005 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SLC1A1P43005 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.9□□□□□ -1.62
SLC1A1P43005 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SLC1A1P43005 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
SLC1A1P43005 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SLC1A1P43005 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SLC1A1P43005 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SLC1A1P43005 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SLC1A1P43005 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.9□□□□□ -1.63
SLC1A1P43005 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.9□□□□□ -1.63
SLC1A1P43005 SEPT7P8-201ENST00000413308 775 ntBASIC4.9□□□□□ -1.63
SLC1A1P43005 AC009237.10-201ENST00000414112 510 ntBASIC4.9□□□□□ -1.63
SLC1A1P43005 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SLC1A1P43005 SERPINA7P1-201ENST00000443077 631 ntBASIC4.9□□□□□ -1.63
SLC1A1P43005 CEACAMP7-201ENST00000444105 496 ntBASIC4.9□□□□□ -1.63
SLC1A1P43005 OR52J1P-201ENST00000450596 932 ntBASIC4.9□□□□□ -1.63
SLC1A1P43005 AC010733.1-201ENST00000451515 401 ntBASIC4.9□□□□□ -1.63
SLC1A1P43005 RN7SL817P-201ENST00000480777 288 ntBASIC4.9□□□□□ -1.63
SLC1A1P43005 DEFB109F-201ENST00000491870 277 ntBASIC4.9□□□□□ -1.63
SLC1A1P43005 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.9□□□□□ -1.63
SLC1A1P43005 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SLC1A1P43005 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.9□□□□□ -1.63
SLC1A1P43005 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.9□□□□□ -1.63
SLC1A1P43005 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.9□□□□□ -1.63
SLC1A1P43005 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.9□□□□□ -1.63
SLC1A1P43005 GSTP1P1-201ENST00000548078 319 ntBASIC4.9□□□□□ -1.63
SLC1A1P43005 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
SLC1A1P43005 RPL7P50-201ENST00000600588 727 ntBASIC4.9□□□□□ -1.63
SLC1A1P43005 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.9□□□□□ -1.63
SLC1A1P43005 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SLC1A1P43005 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.9□□□□□ -1.63
SLC1A1P43005 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SLC1A1P43005 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SLC1A1P43005 AC027228.2-201ENST00000567141 2154 ntBASIC4.89□□□□□ -1.63
SLC1A1P43005 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SLC1A1P43005 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SLC1A1P43005 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
SLC1A1P43005 RNA5SP123-201ENST00000363244 119 ntBASIC4.89□□□□□ -1.63
SLC1A1P43005 SNORA74A-201ENST00000364089 198 ntBASIC4.89□□□□□ -1.63
SLC1A1P43005 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC1A1P43005 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SLC1A1P43005 RN7SKP267-201ENST00000410381 285 ntBASIC4.89□□□□□ -1.63
SLC1A1P43005 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC1A1P43005 AC004448.2-201ENST00000422360 586 ntBASIC4.89□□□□□ -1.63
SLC1A1P43005 RBMY2QP-201ENST00000429799 1147 ntBASIC4.89□□□□□ -1.63
SLC1A1P43005 CYCSP11-201ENST00000436426 315 ntBASIC4.89□□□□□ -1.63
SLC1A1P43005 AC073587.1-201ENST00000447093 876 ntBASIC4.89□□□□□ -1.63
SLC1A1P43005 RBMY2TP-201ENST00000451162 947 ntBASIC4.89□□□□□ -1.63
SLC1A1P43005 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC1A1P43005 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC1A1P43005 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.89□□□□□ -1.63
SLC1A1P43005 AL356390.1-201ENST00000455684 397 ntBASIC4.89□□□□□ -1.63
SLC1A1P43005 ATP5G1P3-201ENST00000463301 410 ntBASIC4.89□□□□□ -1.63
SLC1A1P43005 AC098799.3-201ENST00000506095 438 ntBASIC4.89□□□□□ -1.63
SLC1A1P43005 BTF3P13-201ENST00000513224 490 ntBASIC4.89□□□□□ -1.63
SLC1A1P43005 IGLV2-28-201ENST00000520681 304 ntBASIC4.89□□□□□ -1.63
SLC1A1P43005 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC1A1P43005 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC1A1P43005 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.89□□□□□ -1.63
SLC1A1P43005 HMGN2P6-201ENST00000551091 273 ntBASIC4.89□□□□□ -1.63
SLC1A1P43005 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC1A1P43005 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC1A1P43005 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.89□□□□□ -1.63
SLC1A1P43005 BGLT3-201ENST00000564523 994 ntBASIC4.89□□□□□ -1.63
SLC1A1P43005 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC1A1P43005 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC1A1P43005 AC008966.2-201ENST00000606157 453 ntBASIC4.89□□□□□ -1.63
SLC1A1P43005 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC1A1P43005 MIR6886-201ENST00000619864 61 ntBASIC4.89□□□□□ -1.63
SLC1A1P43005 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
SLC1A1P43005 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC1A1P43005 MAPK10-263ENST00000641052 4307 ntBASIC4.89□□□□□ -1.63
SLC1A1P43005 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SLC1A1P43005 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
SLC1A1P43005 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SLC1A1P43005 AL672167.1-203ENST00000641299 2975 ntBASIC4.89□□□□□ -1.63
SLC1A1P43005 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SLC1A1P43005 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SLC1A1P43005 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SLC1A1P43005 THAP12P8-201ENST00000447914 2115 ntBASIC4.88□□□□□ -1.63
SLC1A1P43005 C4BPAP1-201ENST00000415474 1893 ntBASIC4.88□□□□□ -1.63
SLC1A1P43005 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SLC1A1P43005 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC1A1P43005 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SLC1A1P43005 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.88□□□□□ -1.63
SLC1A1P43005 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.88□□□□□ -1.63
SLC1A1P43005 OR14L1P-202ENST00000641545 3009 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms