Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 GMFB-210ENST00000628554 639 ntTSL 4 BASIC6.44□□□□□ -1.38
CNGA1P29973 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.44□□□□□ -1.38
CNGA1P29973 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.44□□□□□ -1.38
CNGA1P29973 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
CNGA1P29973 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNGA1P29973 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNGA1P29973 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.44□□□□□ -1.38
CNGA1P29973 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC6.44□□□□□ -1.38
CNGA1P29973 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNGA1P29973 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNGA1P29973 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CNGA1P29973 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CNGA1P29973 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.44□□□□□ -1.38
CNGA1P29973 AL606537.1-201ENST00000607258 2011 ntBASIC6.43□□□□□ -1.38
CNGA1P29973 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CNGA1P29973 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CNGA1P29973 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CNGA1P29973 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.43□□□□□ -1.38
CNGA1P29973 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CNGA1P29973 NSRP1P1-201ENST00000444067 1693 ntBASIC6.43□□□□□ -1.38
CNGA1P29973 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC6.43□□□□□ -1.38
CNGA1P29973 AC100871.1-201ENST00000507871 1456 ntBASIC6.43□□□□□ -1.38
CNGA1P29973 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CNGA1P29973 IGKV7-3-201ENST00000357453 298 ntBASIC6.43□□□□□ -1.38
CNGA1P29973 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CNGA1P29973 AL645733.1-201ENST00000402250 217 ntBASIC6.43□□□□□ -1.38
CNGA1P29973 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC6.43□□□□□ -1.38
CNGA1P29973 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC6.43□□□□□ -1.38
CNGA1P29973 NANOGP9-201ENST00000439890 892 ntBASIC6.43□□□□□ -1.38
CNGA1P29973 MTCYBP42-201ENST00000444653 1130 ntBASIC6.43□□□□□ -1.38
CNGA1P29973 AL591719.1-201ENST00000444669 744 ntBASIC6.43□□□□□ -1.38
CNGA1P29973 RPS23P9-201ENST00000448848 438 ntBASIC6.43□□□□□ -1.38
CNGA1P29973 RPL35AP28-201ENST00000459730 331 ntBASIC6.43□□□□□ -1.38
CNGA1P29973 MTCO2P6-201ENST00000463134 685 ntBASIC6.43□□□□□ -1.38
CNGA1P29973 RN7SL222P-201ENST00000476452 299 ntBASIC6.43□□□□□ -1.38
CNGA1P29973 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.43□□□□□ -1.38
CNGA1P29973 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CNGA1P29973 AC091860.1-201ENST00000505723 432 ntBASIC6.43□□□□□ -1.38
CNGA1P29973 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.43□□□□□ -1.38
CNGA1P29973 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC6.43□□□□□ -1.38
CNGA1P29973 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC6.43□□□□□ -1.38
CNGA1P29973 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC6.43□□□□□ -1.38
CNGA1P29973 DEFB130C-202ENST00000530001 230 ntBASIC6.43□□□□□ -1.38
CNGA1P29973 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.43□□□□□ -1.38
CNGA1P29973 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CNGA1P29973 POLR2KP1-201ENST00000553226 168 ntBASIC6.43□□□□□ -1.38
CNGA1P29973 AL358913.1-201ENST00000554342 121 ntBASIC6.43□□□□□ -1.38
CNGA1P29973 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CNGA1P29973 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.43□□□□□ -1.38
CNGA1P29973 CYP2C60P-201ENST00000566088 139 ntBASIC6.43□□□□□ -1.38
CNGA1P29973 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.43□□□□□ -1.38
CNGA1P29973 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC6.43□□□□□ -1.38
CNGA1P29973 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.43□□□□□ -1.38
CNGA1P29973 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC6.43□□□□□ -1.38
CNGA1P29973 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.43□□□□□ -1.38
CNGA1P29973 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC6.43□□□□□ -1.38
CNGA1P29973 AC113368.1-201ENST00000603736 382 ntBASIC6.43□□□□□ -1.38
CNGA1P29973 AL138478.1-201ENST00000612252 832 ntBASIC6.43□□□□□ -1.38
CNGA1P29973 AL139407.1-201ENST00000613826 1175 ntBASIC6.43□□□□□ -1.38
CNGA1P29973 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CNGA1P29973 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CNGA1P29973 AC011330.2-201ENST00000621680 635 ntBASIC6.43□□□□□ -1.38
CNGA1P29973 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.43□□□□□ -1.38
CNGA1P29973 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC6.43□□□□□ -1.38
CNGA1P29973 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
CNGA1P29973 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.43□□□□□ -1.38
CNGA1P29973 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CNGA1P29973 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CNGA1P29973 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CNGA1P29973 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CNGA1P29973 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.43□□□□□ -1.38
CNGA1P29973 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CNGA1P29973 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.43□□□□□ -1.38
CNGA1P29973 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.43□□□□□ -1.38
CNGA1P29973 AC111188.2-201ENST00000529697 1387 ntBASIC6.43□□□□□ -1.38
CNGA1P29973 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
CNGA1P29973 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CNGA1P29973 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CNGA1P29973 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.42□□□□□ -1.38
CNGA1P29973 DDX18P4-201ENST00000511690 1966 ntBASIC6.42□□□□□ -1.38
CNGA1P29973 AC131971.1-201ENST00000332881 1482 ntBASIC6.42□□□□□ -1.38
CNGA1P29973 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.42□□□□□ -1.38
CNGA1P29973 RMST-202ENST00000541282 2099 ntTSL 2 BASIC6.42□□□□□ -1.38
CNGA1P29973 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.42□□□□□ -1.38
CNGA1P29973 RN7SKP103-201ENST00000363848 320 ntBASIC6.42□□□□□ -1.38
CNGA1P29973 RNU4-68P-201ENST00000364314 141 ntBASIC6.42□□□□□ -1.38
CNGA1P29973 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC6.42□□□□□ -1.38
CNGA1P29973 GNG5P2-201ENST00000372054 207 ntBASIC6.42□□□□□ -1.38
CNGA1P29973 SNORD116-12-201ENST00000384468 92 ntBASIC6.42□□□□□ -1.38
CNGA1P29973 MIR513B-201ENST00000385136 84 ntBASIC6.42□□□□□ -1.38
CNGA1P29973 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CNGA1P29973 METTL15P3-201ENST00000415522 1221 ntBASIC6.42□□□□□ -1.38
CNGA1P29973 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC6.42□□□□□ -1.38
CNGA1P29973 RPS3AP37-201ENST00000419176 745 ntBASIC6.42□□□□□ -1.38
CNGA1P29973 AL133325.1-201ENST00000421090 382 ntBASIC6.42□□□□□ -1.38
CNGA1P29973 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.42□□□□□ -1.38
CNGA1P29973 C1DP1-201ENST00000426049 402 ntBASIC6.42□□□□□ -1.38
CNGA1P29973 CDY14P-201ENST00000431260 1014 ntBASIC6.42□□□□□ -1.38
CNGA1P29973 RPS3AP38-201ENST00000435889 763 ntBASIC6.42□□□□□ -1.38
CNGA1P29973 CDY12P-201ENST00000440679 1015 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms