Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AK4P6-201ENST00000505168 528 ntBASIC6.1□□□□□ -1.43
HLA-DOAP06340 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DOAP06340 COX6B1P5-201ENST00000509843 249 ntBASIC6.1□□□□□ -1.43
HLA-DOAP06340 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DOAP06340 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC6.1□□□□□ -1.43
HLA-DOAP06340 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6.1□□□□□ -1.43
HLA-DOAP06340 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.1□□□□□ -1.43
HLA-DOAP06340 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.1□□□□□ -1.43
HLA-DOAP06340 AC004923.2-201ENST00000529649 369 ntBASIC6.1□□□□□ -1.43
HLA-DOAP06340 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.1□□□□□ -1.43
HLA-DOAP06340 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DOAP06340 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC6.1□□□□□ -1.43
HLA-DOAP06340 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC6.1□□□□□ -1.43
HLA-DOAP06340 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC6.1□□□□□ -1.43
HLA-DOAP06340 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.1□□□□□ -1.43
HLA-DOAP06340 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
HLA-DOAP06340 MTCYBP23-201ENST00000558717 1102 ntBASIC6.1□□□□□ -1.43
HLA-DOAP06340 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.1□□□□□ -1.43
HLA-DOAP06340 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
HLA-DOAP06340 AP000919.1-202ENST00000581139 1264 ntBASIC6.1□□□□□ -1.43
HLA-DOAP06340 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.1□□□□□ -1.43
HLA-DOAP06340 AC113368.1-201ENST00000603736 382 ntBASIC6.1□□□□□ -1.43
HLA-DOAP06340 RNU6-1192P-201ENST00000612197 107 ntBASIC6.1□□□□□ -1.43
HLA-DOAP06340 RNU6-489P-201ENST00000618289 107 ntBASIC6.1□□□□□ -1.43
HLA-DOAP06340 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.1□□□□□ -1.43
HLA-DOAP06340 ZNRD1ASP-221ENST00000637794 1074 ntBASIC6.1□□□□□ -1.43
HLA-DOAP06340 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DOAP06340 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DOAP06340 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DOAP06340 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DOAP06340 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DOAP06340 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
HLA-DOAP06340 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.09□□□□□ -1.43
HLA-DOAP06340 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC6.09□□□□□ -1.43
HLA-DOAP06340 AC007996.1-201ENST00000620414 2821 ntBASIC6.09□□□□□ -1.43
HLA-DOAP06340 AL445523.1-201ENST00000451184 1362 ntBASIC6.09□□□□□ -1.43
HLA-DOAP06340 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DOAP06340 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DOAP06340 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DOAP06340 RN7SKP113-201ENST00000363891 295 ntBASIC6.09□□□□□ -1.43
HLA-DOAP06340 RNA5SP223-201ENST00000365174 120 ntBASIC6.09□□□□□ -1.43
HLA-DOAP06340 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC6.09□□□□□ -1.43
HLA-DOAP06340 AL035419.1-201ENST00000397037 564 ntBASIC6.09□□□□□ -1.43
HLA-DOAP06340 Z97832.1-201ENST00000402490 328 ntBASIC6.09□□□□□ -1.43
HLA-DOAP06340 HSFY4P-201ENST00000415994 1181 ntBASIC6.09□□□□□ -1.43
HLA-DOAP06340 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DOAP06340 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.09□□□□□ -1.43
HLA-DOAP06340 AC006994.1-201ENST00000438212 839 ntBASIC6.09□□□□□ -1.43
HLA-DOAP06340 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DOAP06340 MTCO1P53-201ENST00000441633 699 ntBASIC6.09□□□□□ -1.43
HLA-DOAP06340 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.09□□□□□ -1.43
HLA-DOAP06340 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.09□□□□□ -1.43
HLA-DOAP06340 RPL31P44-201ENST00000447680 377 ntBASIC6.09□□□□□ -1.43
HLA-DOAP06340 AC020779.1-201ENST00000478757 796 ntBASIC6.09□□□□□ -1.43
HLA-DOAP06340 AC116562.1-201ENST00000485355 781 ntBASIC6.09□□□□□ -1.43
HLA-DOAP06340 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC6.09□□□□□ -1.43
HLA-DOAP06340 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
HLA-DOAP06340 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC6.09□□□□□ -1.43
HLA-DOAP06340 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.09□□□□□ -1.43
HLA-DOAP06340 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC6.09□□□□□ -1.43
HLA-DOAP06340 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.09□□□□□ -1.43
HLA-DOAP06340 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.09□□□□□ -1.43
HLA-DOAP06340 EMP1-206ENST00000537612 505 ntTSL 3 BASIC6.09□□□□□ -1.43
HLA-DOAP06340 OSBPL9P5-201ENST00000542581 171 ntBASIC6.09□□□□□ -1.43
HLA-DOAP06340 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC6.09□□□□□ -1.43
HLA-DOAP06340 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC6.09□□□□□ -1.43
HLA-DOAP06340 MIR4480-201ENST00000582492 71 ntBASIC6.09□□□□□ -1.43
HLA-DOAP06340 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC6.09□□□□□ -1.43
HLA-DOAP06340 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.09□□□□□ -1.43
HLA-DOAP06340 AC107993.1-201ENST00000591343 684 ntBASIC6.09□□□□□ -1.43
HLA-DOAP06340 PCNAP1-202ENST00000595299 752 ntBASIC6.09□□□□□ -1.43
HLA-DOAP06340 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC6.09□□□□□ -1.43
HLA-DOAP06340 AC025857.2-201ENST00000602711 238 ntBASIC6.09□□□□□ -1.43
HLA-DOAP06340 AC084373.1-201ENST00000603311 235 ntBASIC6.09□□□□□ -1.43
HLA-DOAP06340 AL139344.1-201ENST00000605228 195 ntBASIC6.09□□□□□ -1.43
HLA-DOAP06340 AC007786.3-201ENST00000615154 596 ntBASIC6.09□□□□□ -1.43
HLA-DOAP06340 AC078880.5-201ENST00000617845 421 ntBASIC6.09□□□□□ -1.43
HLA-DOAP06340 AC091953.3-201ENST00000623220 236 ntBASIC6.09□□□□□ -1.43
HLA-DOAP06340 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.09□□□□□ -1.43
HLA-DOAP06340 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DOAP06340 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DOAP06340 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.44
HLA-DOAP06340 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
HLA-DOAP06340 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.09□□□□□ -1.44
HLA-DOAP06340 MUC2-202ENST00000613187 4845 ntBASIC6.09□□□□□ -1.44
HLA-DOAP06340 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
HLA-DOAP06340 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DOAP06340 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DOAP06340 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DOAP06340 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.08□□□□□ -1.44
HLA-DOAP06340 AL513185.3-201ENST00000433335 1300 ntBASIC6.08□□□□□ -1.44
HLA-DOAP06340 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DOAP06340 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.08□□□□□ -1.44
HLA-DOAP06340 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DOAP06340 RN7SKP95-201ENST00000362860 303 ntBASIC6.08□□□□□ -1.44
HLA-DOAP06340 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
HLA-DOAP06340 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DOAP06340 ZNF602P-201ENST00000405929 924 ntBASIC6.08□□□□□ -1.44
HLA-DOAP06340 RANP4-201ENST00000413361 655 ntBASIC6.08□□□□□ -1.44
HLA-DOAP06340 COX6B1P1-201ENST00000415962 213 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms