Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
APOEP02649 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5□□□□□ -1.61
APOEP02649 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
APOEP02649 CASC19-206ENST00000641028 1430 ntBASIC5□□□□□ -1.61
APOEP02649 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5□□□□□ -1.61
APOEP02649 RNA5SP191-201ENST00000362585 102 ntBASIC5□□□□□ -1.61
APOEP02649 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5□□□□□ -1.61
APOEP02649 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5□□□□□ -1.61
APOEP02649 LINC00993-201ENST00000420453 540 ntBASIC5□□□□□ -1.61
APOEP02649 EIF4HP2-201ENST00000424380 563 ntBASIC5□□□□□ -1.61
APOEP02649 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5□□□□□ -1.61
APOEP02649 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5□□□□□ -1.61
APOEP02649 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5□□□□□ -1.61
APOEP02649 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5□□□□□ -1.61
APOEP02649 OR9N1P-201ENST00000491296 333 ntBASIC5□□□□□ -1.61
APOEP02649 AC105233.1-201ENST00000498840 781 ntBASIC5□□□□□ -1.61
APOEP02649 AC073358.1-201ENST00000505671 684 ntBASIC5□□□□□ -1.61
APOEP02649 RNU1-6P-201ENST00000516290 144 ntBASIC5□□□□□ -1.61
APOEP02649 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5□□□□□ -1.61
APOEP02649 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5□□□□□ -1.61
APOEP02649 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5□□□□□ -1.61
APOEP02649 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5□□□□□ -1.61
APOEP02649 AL391358.1-201ENST00000605342 190 ntBASIC5□□□□□ -1.61
APOEP02649 AL353600.1-201ENST00000608148 251 ntBASIC5□□□□□ -1.61
APOEP02649 AC116651.1-201ENST00000609724 556 ntBASIC5□□□□□ -1.61
APOEP02649 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5□□□□□ -1.61
APOEP02649 AC132825.8-201ENST00000640783 297 ntBASIC5□□□□□ -1.61
APOEP02649 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
APOEP02649 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5□□□□□ -1.61
APOEP02649 LDHAL6CP-202ENST00000550738 3224 ntBASIC5□□□□□ -1.61
APOEP02649 SMG1P6-201ENST00000532337 2930 ntBASIC5□□□□□ -1.61
APOEP02649 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
APOEP02649 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.99□□□□□ -1.61
APOEP02649 AC104118.1-201ENST00000607625 1589 ntBASIC4.99□□□□□ -1.61
APOEP02649 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
APOEP02649 DDX18P5-201ENST00000534547 1306 ntBASIC4.99□□□□□ -1.61
APOEP02649 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.99□□□□□ -1.61
APOEP02649 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
APOEP02649 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.99□□□□□ -1.61
APOEP02649 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
APOEP02649 AC053481.2-202ENST00000582394 1500 ntBASIC4.99□□□□□ -1.61
APOEP02649 AC011503.2-201ENST00000594230 1500 ntBASIC4.99□□□□□ -1.61
APOEP02649 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
APOEP02649 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
APOEP02649 AC008549.2-201ENST00000333482 706 ntBASIC4.99□□□□□ -1.61
APOEP02649 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
APOEP02649 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.99□□□□□ -1.61
APOEP02649 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
APOEP02649 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
APOEP02649 SNORA11B-201ENST00000408175 129 ntBASIC4.99□□□□□ -1.61
APOEP02649 SNORA79B-201ENST00000410557 148 ntBASIC4.99□□□□□ -1.61
APOEP02649 RN7SKP100-201ENST00000411258 284 ntBASIC4.99□□□□□ -1.61
APOEP02649 RBMY2KP-201ENST00000418221 992 ntBASIC4.99□□□□□ -1.61
APOEP02649 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.99□□□□□ -1.61
APOEP02649 AC004074.1-201ENST00000421810 1063 ntBASIC4.99□□□□□ -1.61
APOEP02649 NRBF2P3-201ENST00000432731 865 ntBASIC4.99□□□□□ -1.61
APOEP02649 AL049745.1-201ENST00000433953 286 ntBASIC4.99□□□□□ -1.61
APOEP02649 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.99□□□□□ -1.61
APOEP02649 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.99□□□□□ -1.61
APOEP02649 SBDSP1-204ENST00000453858 737 ntBASIC4.99□□□□□ -1.61
APOEP02649 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
APOEP02649 AC104971.1-201ENST00000495117 578 ntBASIC4.99□□□□□ -1.61
APOEP02649 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.99□□□□□ -1.61
APOEP02649 RN7SKP46-201ENST00000515942 234 ntBASIC4.99□□□□□ -1.61
APOEP02649 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.99□□□□□ -1.61
APOEP02649 RN7SL802P-201ENST00000577858 299 ntBASIC4.99□□□□□ -1.61
APOEP02649 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.99□□□□□ -1.61
APOEP02649 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.99□□□□□ -1.61
APOEP02649 BNIP3P32-201ENST00000600015 554 ntBASIC4.99□□□□□ -1.61
APOEP02649 AC011453.2-201ENST00000603737 729 ntBASIC4.99□□□□□ -1.61
APOEP02649 AC087283.1-201ENST00000604029 1074 ntBASIC4.99□□□□□ -1.61
APOEP02649 TLK1P1-201ENST00000456760 2440 ntBASIC4.99□□□□□ -1.61
APOEP02649 MAPK10-320ENST00000641462 6696 ntBASIC4.99□□□□□ -1.61
APOEP02649 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
APOEP02649 DHX9P1-201ENST00000436565 3076 ntBASIC4.99□□□□□ -1.61
APOEP02649 LINC01109-201ENST00000603837 3081 ntBASIC4.99□□□□□ -1.61
APOEP02649 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
APOEP02649 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
APOEP02649 SALL4P2-201ENST00000423288 2910 ntBASIC4.99□□□□□ -1.61
APOEP02649 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.98□□□□□ -1.61
APOEP02649 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
APOEP02649 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.98□□□□□ -1.61
APOEP02649 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.98□□□□□ -1.61
APOEP02649 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
APOEP02649 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.98□□□□□ -1.61
APOEP02649 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
APOEP02649 RN7SKP224-201ENST00000364140 325 ntBASIC4.98□□□□□ -1.61
APOEP02649 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
APOEP02649 RPS24P12-201ENST00000402084 394 ntBASIC4.98□□□□□ -1.61
APOEP02649 AP000580.1-201ENST00000404439 358 ntBASIC4.98□□□□□ -1.61
APOEP02649 BX510359.2-201ENST00000417920 305 ntBASIC4.98□□□□□ -1.61
APOEP02649 RANP7-201ENST00000418085 644 ntBASIC4.98□□□□□ -1.61
APOEP02649 EIF4A1P1-201ENST00000420241 934 ntBASIC4.98□□□□□ -1.61
APOEP02649 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.98□□□□□ -1.61
APOEP02649 OR2B7P-201ENST00000429302 934 ntBASIC4.98□□□□□ -1.61
APOEP02649 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.98□□□□□ -1.61
APOEP02649 AC073587.1-201ENST00000447093 876 ntBASIC4.98□□□□□ -1.61
APOEP02649 CYCSP34-201ENST00000458172 304 ntBASIC4.98□□□□□ -1.61
APOEP02649 AC112206.1-201ENST00000468416 477 ntBASIC4.98□□□□□ -1.61
APOEP02649 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms