Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.45□□□□□ -1.54
COL4A1P02462 MAPK10-328ENST00000641553 4009 ntBASIC5.45□□□□□ -1.54
COL4A1P02462 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL4A1P02462 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL4A1P02462 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL4A1P02462 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL4A1P02462 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL4A1P02462 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
COL4A1P02462 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL4A1P02462 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL4A1P02462 AC025750.1-201ENST00000399891 379 ntBASIC5.44□□□□□ -1.54
COL4A1P02462 Z98745.1-201ENST00000402553 494 ntBASIC5.44□□□□□ -1.54
COL4A1P02462 ARAFP1-201ENST00000422172 605 ntBASIC5.44□□□□□ -1.54
COL4A1P02462 UBE2V1P3-201ENST00000439651 417 ntBASIC5.44□□□□□ -1.54
COL4A1P02462 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.44□□□□□ -1.54
COL4A1P02462 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.44□□□□□ -1.54
COL4A1P02462 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.44□□□□□ -1.54
COL4A1P02462 IMMP1LP1-201ENST00000605170 488 ntBASIC5.44□□□□□ -1.54
COL4A1P02462 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
COL4A1P02462 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.44□□□□□ -1.54
COL4A1P02462 AC008013.2-202ENST00000637965 364 ntBASIC5.44□□□□□ -1.54
COL4A1P02462 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL4A1P02462 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL4A1P02462 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL4A1P02462 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
COL4A1P02462 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL4A1P02462 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
COL4A1P02462 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL4A1P02462 AL158073.1-201ENST00000426848 1104 ntBASIC5.43□□□□□ -1.54
COL4A1P02462 AL355852.1-201ENST00000454081 1771 ntBASIC5.43□□□□□ -1.54
COL4A1P02462 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.43□□□□□ -1.54
COL4A1P02462 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL4A1P02462 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL4A1P02462 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.43□□□□□ -1.54
COL4A1P02462 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.43□□□□□ -1.54
COL4A1P02462 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL4A1P02462 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.43□□□□□ -1.54
COL4A1P02462 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
COL4A1P02462 AP002360.3-201ENST00000607673 710 ntBASIC5.43□□□□□ -1.54
COL4A1P02462 uc_338.13-201ENST00000618243 179 ntBASIC5.43□□□□□ -1.54
COL4A1P02462 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.43□□□□□ -1.54
COL4A1P02462 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.43□□□□□ -1.54
COL4A1P02462 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL4A1P02462 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
COL4A1P02462 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC5.43□□□□□ -1.54
COL4A1P02462 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
COL4A1P02462 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
COL4A1P02462 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
COL4A1P02462 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
COL4A1P02462 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
COL4A1P02462 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.43□□□□□ -1.54
COL4A1P02462 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL4A1P02462 AL122126.1-201ENST00000546905 1318 ntBASIC5.43□□□□□ -1.54
COL4A1P02462 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL4A1P02462 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL4A1P02462 PPIAP31-201ENST00000405422 495 ntBASIC5.43□□□□□ -1.54
COL4A1P02462 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.43□□□□□ -1.54
COL4A1P02462 AC011998.1-201ENST00000433403 117 ntBASIC5.43□□□□□ -1.54
COL4A1P02462 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.43□□□□□ -1.54
COL4A1P02462 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.43□□□□□ -1.54
COL4A1P02462 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.43□□□□□ -1.54
COL4A1P02462 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.43□□□□□ -1.54
COL4A1P02462 AC090286.3-201ENST00000573133 187 ntBASIC5.43□□□□□ -1.54
COL4A1P02462 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.43□□□□□ -1.54
COL4A1P02462 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL4A1P02462 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
COL4A1P02462 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL4A1P02462 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL4A1P02462 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL4A1P02462 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL4A1P02462 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL4A1P02462 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL4A1P02462 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL4A1P02462 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.42□□□□□ -1.54
COL4A1P02462 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL4A1P02462 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
COL4A1P02462 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.42□□□□□ -1.54
COL4A1P02462 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.42□□□□□ -1.54
COL4A1P02462 AL157831.1-201ENST00000426134 473 ntBASIC5.42□□□□□ -1.54
COL4A1P02462 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.42□□□□□ -1.54
COL4A1P02462 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL4A1P02462 AC093815.1-201ENST00000508637 280 ntBASIC5.42□□□□□ -1.54
COL4A1P02462 AC108064.1-201ENST00000513791 460 ntBASIC5.42□□□□□ -1.54
COL4A1P02462 RNA5SP519-201ENST00000516480 119 ntBASIC5.42□□□□□ -1.54
COL4A1P02462 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.42□□□□□ -1.54
COL4A1P02462 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.42□□□□□ -1.54
COL4A1P02462 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.42□□□□□ -1.54
COL4A1P02462 AC006116.5-201ENST00000591936 559 ntBASIC5.42□□□□□ -1.54
COL4A1P02462 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL4A1P02462 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
COL4A1P02462 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL4A1P02462 AC020656.2-201ENST00000613291 5309 ntBASIC5.41□□□□□ -1.54
COL4A1P02462 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL4A1P02462 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL4A1P02462 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL4A1P02462 AL603750.1-201ENST00000624216 1717 ntBASIC5.41□□□□□ -1.54
COL4A1P02462 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL4A1P02462 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.41□□□□□ -1.54
COL4A1P02462 RPL21P65-201ENST00000406094 466 ntBASIC5.41□□□□□ -1.54
COL4A1P02462 RN7SKP235-201ENST00000410662 305 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms