Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC188H7C350 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.12□□□□□ -1.59
CCDC188H7C350 AC011411.1-201ENST00000509592 876 ntBASIC5.12□□□□□ -1.59
CCDC188H7C350 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.12□□□□□ -1.59
CCDC188H7C350 AC027544.3-201ENST00000535082 757 ntBASIC5.12□□□□□ -1.59
CCDC188H7C350 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC188H7C350 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.12□□□□□ -1.59
CCDC188H7C350 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC188H7C350 SETP1-201ENST00000556014 845 ntBASIC5.12□□□□□ -1.59
CCDC188H7C350 AC027176.2-201ENST00000559166 746 ntBASIC5.12□□□□□ -1.59
CCDC188H7C350 AC087477.6-201ENST00000559595 843 ntBASIC5.12□□□□□ -1.59
CCDC188H7C350 AC021483.2-201ENST00000567415 758 ntBASIC5.12□□□□□ -1.59
CCDC188H7C350 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC188H7C350 AL355802.4-201ENST00000607635 548 ntBASIC5.12□□□□□ -1.59
CCDC188H7C350 AC012414.7-202ENST00000622705 1090 ntBASIC5.12□□□□□ -1.59
CCDC188H7C350 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.12□□□□□ -1.59
CCDC188H7C350 DDX18P4-201ENST00000511690 1966 ntBASIC5.12□□□□□ -1.59
CCDC188H7C350 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.12□□□□□ -1.59
CCDC188H7C350 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
CCDC188H7C350 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC188H7C350 ZNF733P-202ENST00000444809 1573 ntBASIC5.12□□□□□ -1.59
CCDC188H7C350 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.12□□□□□ -1.59
CCDC188H7C350 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.11□□□□□ -1.59
CCDC188H7C350 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CCDC188H7C350 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC188H7C350 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC188H7C350 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC188H7C350 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC188H7C350 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC188H7C350 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CCDC188H7C350 RNU6-532P-201ENST00000384318 107 ntBASIC5.11□□□□□ -1.59
CCDC188H7C350 Z86062.1-201ENST00000406773 777 ntBASIC5.11□□□□□ -1.59
CCDC188H7C350 MTATP6P19-201ENST00000413797 659 ntBASIC5.11□□□□□ -1.59
CCDC188H7C350 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC188H7C350 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC188H7C350 TCEA1P1-201ENST00000449716 880 ntBASIC5.11□□□□□ -1.59
CCDC188H7C350 IGHV5-78-201ENST00000450948 295 ntBASIC5.11□□□□□ -1.59
CCDC188H7C350 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC188H7C350 RPS27AP2-201ENST00000457576 465 ntBASIC5.11□□□□□ -1.59
CCDC188H7C350 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC188H7C350 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC188H7C350 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC188H7C350 RN7SL558P-201ENST00000497468 299 ntBASIC5.11□□□□□ -1.59
CCDC188H7C350 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC188H7C350 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC188H7C350 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC188H7C350 NPM1P35-201ENST00000533043 868 ntBASIC5.11□□□□□ -1.59
CCDC188H7C350 AC023158.1-201ENST00000561632 1025 ntBASIC5.11□□□□□ -1.59
CCDC188H7C350 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC188H7C350 AC006272.2-201ENST00000594725 163 ntBASIC5.11□□□□□ -1.59
CCDC188H7C350 RNA5SP440-201ENST00000612665 119 ntBASIC5.11□□□□□ -1.59
CCDC188H7C350 MTND4P21-201ENST00000453886 1357 ntBASIC5.11□□□□□ -1.59
CCDC188H7C350 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC188H7C350 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC188H7C350 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC188H7C350 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC188H7C350 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC188H7C350 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
CCDC188H7C350 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC188H7C350 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC188H7C350 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC188H7C350 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC188H7C350 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC188H7C350 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CCDC188H7C350 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CCDC188H7C350 AC009804.1-201ENST00000400949 179 ntBASIC5.1□□□□□ -1.59
CCDC188H7C350 UBE2V1P15-201ENST00000407776 448 ntBASIC5.1□□□□□ -1.59
CCDC188H7C350 SNORA11B-201ENST00000408175 129 ntBASIC5.1□□□□□ -1.59
CCDC188H7C350 RN7SKP222-201ENST00000410651 315 ntBASIC5.1□□□□□ -1.59
CCDC188H7C350 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC188H7C350 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC188H7C350 RPS29P14-201ENST00000431518 171 ntBASIC5.1□□□□□ -1.59
CCDC188H7C350 ZNF965P-201ENST00000432501 817 ntBASIC5.1□□□□□ -1.59
CCDC188H7C350 PTP4A1P3-201ENST00000433661 420 ntBASIC5.1□□□□□ -1.59
CCDC188H7C350 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC188H7C350 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC188H7C350 TDGF1P1-201ENST00000445734 527 ntBASIC5.1□□□□□ -1.59
CCDC188H7C350 CASP3P1-201ENST00000446037 609 ntBASIC5.1□□□□□ -1.59
CCDC188H7C350 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.1□□□□□ -1.59
CCDC188H7C350 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC188H7C350 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC188H7C350 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC188H7C350 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC188H7C350 RN7SL466P-201ENST00000497546 295 ntBASIC5.1□□□□□ -1.59
CCDC188H7C350 SETP12-201ENST00000514068 805 ntBASIC5.1□□□□□ -1.59
CCDC188H7C350 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.1□□□□□ -1.59
CCDC188H7C350 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC188H7C350 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC188H7C350 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC188H7C350 RPL21P7-201ENST00000557463 483 ntBASIC5.1□□□□□ -1.59
CCDC188H7C350 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC188H7C350 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC188H7C350 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.1□□□□□ -1.59
CCDC188H7C350 AC140113.4-201ENST00000622087 222 ntBASIC5.1□□□□□ -1.59
CCDC188H7C350 AP003497.2-201ENST00000624220 967 ntBASIC5.1□□□□□ -1.59
CCDC188H7C350 AL672167.1-205ENST00000641112 3080 ntBASIC5.1□□□□□ -1.59
CCDC188H7C350 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC188H7C350 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC188H7C350 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC188H7C350 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms