Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC092106.2-201ENST00000436597 487 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 SKP1P1-201ENST00000438081 489 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 AC002504.1-201ENST00000438281 691 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 AC093019.1-201ENST00000443135 252 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 YWHAQP9-201ENST00000445891 512 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 RPS20P24-201ENST00000457473 361 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 BX323845.2-201ENST00000458382 234 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 RN7SL149P-201ENST00000465197 281 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 RBM43P1-201ENST00000476891 1081 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 TAAR3P-202ENST00000481759 1025 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 HMGN1P12-201ENST00000499125 195 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 AC114981.1-201ENST00000503897 678 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 AC093809.1-201ENST00000509155 340 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 AC105914.1-201ENST00000511798 226 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 AC010493.1-201ENST00000513479 292 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 LRRC34P2-201ENST00000514850 553 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 AC008429.4-201ENST00000521201 182 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 AC123904.3-201ENST00000547218 814 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 COX6CP11-201ENST00000555293 229 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 AC106785.4-201ENST00000569492 412 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 BOLA2P1-201ENST00000584794 232 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 AC103710.4-201ENST00000609301 899 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 AC104010.1-201ENST00000616889 150 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 AC068880.5-201ENST00000624331 290 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 AC005618.4-201ENST00000625053 554 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 RACK1-235ENST00000626067 564 ntTSL 2 BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 AC004014.2-201ENST00000623718 5122 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 AC116158.1-201ENST00000560231 2129 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 BX284613.1-201ENST00000452221 1641 ntBASIC5.81□□□□□ -1.48
SHISA3A0PJX4 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHISA3A0PJX4 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 RNF6P1-201ENST00000444889 1784 ntBASIC5.8□□□□□ -1.48
SHISA3A0PJX4 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 AL355488.2-201ENST00000609909 2850 ntBASIC5.8□□□□□ -1.48
SHISA3A0PJX4 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 AC020658.2-201ENST00000559030 4020 ntBASIC5.8□□□□□ -1.48
SHISA3A0PJX4 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 RNU6-1103P-201ENST00000384150 107 ntBASIC5.8□□□□□ -1.48
SHISA3A0PJX4 NHP2P2-201ENST00000396362 460 ntBASIC5.8□□□□□ -1.48
SHISA3A0PJX4 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 AL023284.3-201ENST00000407767 334 ntBASIC5.8□□□□□ -1.48
SHISA3A0PJX4 CYCSP17-201ENST00000407870 315 ntBASIC5.8□□□□□ -1.48
SHISA3A0PJX4 AC073264.1-201ENST00000411508 416 ntBASIC5.8□□□□□ -1.48
SHISA3A0PJX4 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 AL158073.1-201ENST00000426848 1104 ntBASIC5.8□□□□□ -1.48
SHISA3A0PJX4 PHBP4-201ENST00000437447 837 ntBASIC5.8□□□□□ -1.48
SHISA3A0PJX4 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 MTND6P13-201ENST00000443510 523 ntBASIC5.8□□□□□ -1.48
SHISA3A0PJX4 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 GAPDHP17-201ENST00000449858 1001 ntBASIC5.8□□□□□ -1.48
SHISA3A0PJX4 AL590365.1-201ENST00000450788 243 ntBASIC5.8□□□□□ -1.48
SHISA3A0PJX4 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 RPS29P25-201ENST00000481709 171 ntBASIC5.8□□□□□ -1.48
SHISA3A0PJX4 RPS3AP14-201ENST00000483907 780 ntBASIC5.8□□□□□ -1.48
SHISA3A0PJX4 RN7SL647P-201ENST00000485429 300 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms