Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 FRG1DP-201ENST00000635586 771 ntBASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.46□□□□□ -1.7
MRPS28Q9Y2Q9 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 AC091305.2-201ENST00000624049 1576 ntBASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 HSPA8P17-201ENST00000427029 1382 ntBASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 TMSB4XP4-201ENST00000323496 618 ntBASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 RPL22P22-201ENST00000395439 379 ntBASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 AC104843.2-201ENST00000427666 297 ntBASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 NPM1P22-201ENST00000427761 952 ntBASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 DSTNP5-201ENST00000427921 523 ntBASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 RPL35AP21-201ENST00000437667 333 ntBASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 AL161636.2-201ENST00000445179 927 ntBASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 AC073909.1-201ENST00000447112 999 ntBASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 SETP20-201ENST00000457046 852 ntBASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 AC104109.1-201ENST00000498563 436 ntBASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 AC096571.1-202ENST00000506634 735 ntBASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 MTATP6P1-201ENST00000514057 681 ntBASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 BNIP3P1-201ENST00000547295 580 ntBASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 AC090666.1-201ENST00000578241 445 ntBASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 MIR4505-201ENST00000582238 73 ntBASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 BNIP3P38-201ENST00000601117 544 ntBASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 AP000864.1-201ENST00000609424 650 ntBASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 AC108359.1-201ENST00000616451 1211 ntBASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 AC090617.9-201ENST00000623751 147 ntBASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 AC097520.1-201ENST00000624435 385 ntBASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 MIR4302-201ENST00000638058 60 ntBASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 AC000374.1-201ENST00000434698 1745 ntBASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 VPS35P1-201ENST00000563400 1518 ntBASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
MRPS28Q9Y2Q9 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 BTBD10P1-201ENST00000549824 1352 ntBASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms