Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 PTMAP3-201ENST00000447474 330 ntBASIC4.72□□□□□ -1.65
NDE1Q9NXR1 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.72□□□□□ -1.65
NDE1Q9NXR1 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 AC108022.1-201ENST00000493466 478 ntBASIC4.72□□□□□ -1.65
NDE1Q9NXR1 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 AC087477.6-201ENST00000559595 843 ntBASIC4.72□□□□□ -1.65
NDE1Q9NXR1 AC010547.6-201ENST00000571789 193 ntBASIC4.72□□□□□ -1.65
NDE1Q9NXR1 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 AL158211.2-201ENST00000607282 395 ntBASIC4.72□□□□□ -1.65
NDE1Q9NXR1 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.72□□□□□ -1.65
NDE1Q9NXR1 AL591926.1-201ENST00000620542 217 ntBASIC4.72□□□□□ -1.65
NDE1Q9NXR1 AC080188.3-201ENST00000624842 748 ntBASIC4.72□□□□□ -1.65
NDE1Q9NXR1 SAMMSON-209ENST00000641222 1100 ntBASIC4.72□□□□□ -1.65
NDE1Q9NXR1 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
NDE1Q9NXR1 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 AC245100.2-201ENST00000454544 1679 ntBASIC4.71□□□□□ -1.66
NDE1Q9NXR1 ECM1P2-201ENST00000503354 1577 ntBASIC4.71□□□□□ -1.66
NDE1Q9NXR1 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 MIR600-201ENST00000385007 98 ntBASIC4.71□□□□□ -1.66
NDE1Q9NXR1 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 UBE2V1P15-201ENST00000407776 448 ntBASIC4.71□□□□□ -1.66
NDE1Q9NXR1 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 HLA-DPA3-207ENST00000454398 229 ntBASIC4.71□□□□□ -1.66
NDE1Q9NXR1 AC104339.1-201ENST00000465478 348 ntBASIC4.71□□□□□ -1.66
NDE1Q9NXR1 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 MTND3P3-201ENST00000505004 126 ntBASIC4.71□□□□□ -1.66
NDE1Q9NXR1 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 RFPL4AP3-201ENST00000515267 345 ntBASIC4.71□□□□□ -1.66
NDE1Q9NXR1 RNU6-760P-201ENST00000516078 97 ntBASIC4.71□□□□□ -1.66
NDE1Q9NXR1 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 TOMM20P1-201ENST00000534518 427 ntBASIC4.71□□□□□ -1.66
NDE1Q9NXR1 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 AC010245.2-201ENST00000606908 1167 ntBASIC4.71□□□□□ -1.66
NDE1Q9NXR1 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 AL512506.1-201ENST00000613918 449 ntBASIC4.71□□□□□ -1.66
NDE1Q9NXR1 AC015804.1-201ENST00000622935 435 ntBASIC4.71□□□□□ -1.66
NDE1Q9NXR1 LINC00216-201ENST00000623548 1126 ntBASIC4.71□□□□□ -1.66
NDE1Q9NXR1 AP002371.2-201ENST00000624450 503 ntBASIC4.71□□□□□ -1.66
NDE1Q9NXR1 AL138960.2-201ENST00000625145 535 ntBASIC4.71□□□□□ -1.66
NDE1Q9NXR1 AC119674.1-220ENST00000641502 1048 ntBASIC4.71□□□□□ -1.66
NDE1Q9NXR1 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
NDE1Q9NXR1 AL445487.1-201ENST00000415694 1580 ntBASIC4.7□□□□□ -1.66
NDE1Q9NXR1 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.7□□□□□ -1.66
NDE1Q9NXR1 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NDE1Q9NXR1 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NDE1Q9NXR1 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NDE1Q9NXR1 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.7□□□□□ -1.66
NDE1Q9NXR1 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
NDE1Q9NXR1 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NDE1Q9NXR1 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NDE1Q9NXR1 AC023490.2-201ENST00000359859 470 ntBASIC4.7□□□□□ -1.66
NDE1Q9NXR1 RNU1-108P-201ENST00000362556 161 ntBASIC4.7□□□□□ -1.66
NDE1Q9NXR1 RNA5SP234-201ENST00000363916 119 ntBASIC4.7□□□□□ -1.66
NDE1Q9NXR1 SNORA70.10-201ENST00000384515 134 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms