Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 AC073073.2-201ENST00000609827 2578 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 CD164-203ENST00000324953 2936 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 BACH2-201ENST00000257749 9113 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 NLRP12-204ENST00000391773 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 ME1-201ENST00000369705 3371 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AL162727.1-201ENST00000437712 3043 ntTSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 FOXJ2-202ENST00000428177 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 EPS15L1-203ENST00000535753 2666 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 RBM22-201ENST00000199814 2342 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 SPATS2L-206ENST00000409385 2320 ntTSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 MMP2-203ENST00000543485 1978 ntTSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 ALPK1-205ENST00000504176 5203 ntAPPRIS ALT2 TSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 OR3A4P-201ENST00000323164 1624 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 RTN4-206ENST00000394611 4161 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 OR2Z1-201ENST00000324060 1056 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 RPS10-202ENST00000344700 650 ntTSL 3 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 MTCP1-201ENST00000362018 570 ntAPPRIS P1 TSL 3 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 RNU5F-1-201ENST00000362507 117 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 RNU6-369P-201ENST00000362515 102 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 RNU6-446P-201ENST00000362827 106 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 RNU6-1079P-201ENST00000362861 110 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 RNU6-582P-201ENST00000362989 107 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 RNU6-340P-201ENST00000364005 107 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 RNU6-1048P-201ENST00000364054 107 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 SNORD113-4-201ENST00000364802 75 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 USF1-201ENST00000368019 998 ntTSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 THEM5-201ENST00000368817 984 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 DEFA1-201ENST00000382679 406 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 Y_RNA.430-201ENST00000384081 110 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 MIR197-201ENST00000384976 75 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 SNORD73A-201ENST00000386062 65 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 RNA5SP207-201ENST00000390874 107 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 RNU6-930P-201ENST00000390938 100 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 RNU6-952P-201ENST00000391164 108 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 RNU6-630P-201ENST00000391258 106 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AL353133.2-201ENST00000402173 411 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 MIR548F3-201ENST00000408509 87 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 RN7SKP85-201ENST00000411349 318 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AC007179.2-205ENST00000412409 707 ntTSL 3 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 SOX9-AS1-201ENST00000412640 635 ntTSL 3 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 MAGEB6P1-201ENST00000416929 1224 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 PRAC2-201ENST00000422730 577 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 GAPDHP55-201ENST00000423136 803 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AL627313.1-201ENST00000428860 238 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 ORM2-201ENST00000431067 760 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 NINJ2-203ENST00000433832 945 ntTSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AL050331.1-201ENST00000435100 623 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 LSM3P3-201ENST00000436601 306 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 Z82188.1-201ENST00000436709 154 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AL391987.3-201ENST00000441101 719 ntTSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 ANO7L1-201ENST00000442385 328 ntTSL 3 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 ATP5J2LP-201ENST00000444161 235 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AC016700.2-201ENST00000446011 156 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 WWC2-204ENST00000448232 6356 ntTSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AL136376.1-201ENST00000449303 515 ntTSL 3 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 LINC02543-201ENST00000451285 845 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 IGHV3-64-201ENST00000454421 431 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AC119749.1-201ENST00000454884 691 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 RPS5P7-201ENST00000456664 608 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AC073089.1-201ENST00000457546 214 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 LAMTOR4-203ENST00000460732 616 ntTSL 3 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AL590326.1-201ENST00000460857 334 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 RN7SL734P-201ENST00000460858 298 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 RN7SL266P-201ENST00000465140 289 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 RN7SL18P-201ENST00000466851 291 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AC053481.1-201ENST00000467217 306 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 RN7SL806P-201ENST00000467399 282 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 RN7SL851P-201ENST00000480512 303 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AC007160.1-201ENST00000488095 319 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AL627309.7-201ENST00000494149 755 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 RN7SL285P-201ENST00000496478 264 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AC091180.2-201ENST00000502823 545 ntTSL 4 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 CRYZP2-201ENST00000504217 1049 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 MLN-203ENST00000507738 400 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AC090519.1-201ENST00000508195 1002 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 LINC01341-205ENST00000509202 503 ntTSL 4 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AC008885.1-201ENST00000514930 301 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 RNU6-1334P-201ENST00000516032 105 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 RNU6-155P-201ENST00000516347 100 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 RNA5SP165-201ENST00000517142 115 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AC100810.2-201ENST00000517626 927 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AC008429.3-201ENST00000519755 489 ntTSL 3 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 RPL23AP53-201ENST00000521854 457 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AC083923.1-201ENST00000523708 376 ntBASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 CSRP1-207ENST00000526256 582 ntTSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-4Q9BYR3 AC007751.1-201ENST00000529260 376 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms